| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_1708 |
|---|
| Symbol | |
|---|
| ID | 5154707 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 1780663 |
|---|
| End bp | 1781070 |
|---|
| Gene Length | 408 bp |
|---|
| Protein Length | 135 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640556665 |
|---|
| Product | putative cytochrome c |
|---|
| Protein accession | YP_001237823 |
|---|
| Protein GI | 148253238 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG3474] Cytochrome c2 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.329257 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGGGAC GGCGTGCGGC GCAATACGCG CTTCTTCTGT GTGGGTCATT CATTGGCGCG
GTGCTGAGCA CCACGATTGC GTTTGCGCAG ATGGCCCTGC CTGCCCCAAA GCCTGTCGAT
GGCGCGACCT TGTTCAAGCA GCAATGCGGT GTCTGCCATA CGCTGAGCAG CGCCGAGCCG
ATGCGGCAGG GACCGCCGCT GACGAAAGTC GTCGGCCGAC GCGCAGGTTC GGTCGAAGGC
TTCCGCTATT CGGCCGGCTT CGCCAAGGCC GATTTCACCT GGGATGAGGC CAGGCTCGAT
GCTTGGCTGA CCAACCCGCA AGAGCTGATC CCCGGCGCCG TGATGGCCTA CCGCCAAGCC
AAGCCCGAAT TGCGCGCCGC GATCATCACC TATCTGAAGG ACAATTGA
|
|---|
| Protein sequence | MSGRRAAQYA LLLCGSFIGA VLSTTIAFAQ MALPAPKPVD GATLFKQQCG VCHTLSSAEP
MRQGPPLTKV VGRRAGSVEG FRYSAGFAKA DFTWDEARLD AWLTNPQELI PGAVMAYRQA
KPELRAAIIT YLKDN
|
|---|
| |