| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_1654 |
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| Symbol | |
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| ID | 5154014 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 1728158 |
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| End bp | 1728913 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640556612 |
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| Product | 2-haloacid dehalogenase |
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| Protein accession | YP_001237770 |
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| Protein GI | 148253185 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01428] 2-haloalkanoic acid dehalogenase, type II
[TIGR01493] Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGCCG TGCCATTCAA AGCTGTGGTC TTTGACGCCT ATGGCACGCT GTACGACATC
CAGTCGGTGG CGGCCGTCAC CGAACAGGCC TTCCCCGGCC ATGGCGACAT CATCACCCAG
ATCTGGCGCA TCAAGCAGCT CGAATACACG TGGCTGCGCT CGCTGATGCA GCGCTACGAG
GATTTTGCCG TCGTCACCCG CGACTCGCTG ATCTACACGC TGCGCATTCT CGGGCTTCCC
GCTGATGCAG CCACGCTGGA CCGCATCATC GCCAAGTACC TCGATCTGGA TCCCTATCCC
GACGCACGGG CCGCGCTTGC AGCGATGAAG CCTCACCGGC TTGCGACCCT CTCCAACGGC
AGCCCCGCGA TGCTCGGCGC GCTGGTCAAG GCCAGCGGTT TCGACACGCT GCTCGACGCC
GTCATCAGCG TCGATGCGCG CCAGATCTTC AAGCCGAGCC CAGAGGCCTA TGCGCTGATT
GAGCAGACGC TCGGCCTGGC GCCGTCCGAT GTGCTGTTCG TGTCGTCCAA TCCGTGGGAC
GTGTGCGGCG CCAAGGCCTT TGGATTGAGC GTCGCCTGGA TCGAGCGTGT CACGCCGCAG
GCCATGGCTG CAGCCTGCAT CAAGACCGAG TTGGTGGCGC CGCTGACCCT GTTCAAGGCG
CTGCGCACCC AGATGGACGA GTTGGGTTTT GCGCCCGATT ATCGTATTGC TGCGCTGTCC
GACCTGCCTG AGATCGCAAG CCAGCATGAG CCTTGA
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| Protein sequence | MSAVPFKAVV FDAYGTLYDI QSVAAVTEQA FPGHGDIITQ IWRIKQLEYT WLRSLMQRYE
DFAVVTRDSL IYTLRILGLP ADAATLDRII AKYLDLDPYP DARAALAAMK PHRLATLSNG
SPAMLGALVK ASGFDTLLDA VISVDARQIF KPSPEAYALI EQTLGLAPSD VLFVSSNPWD
VCGAKAFGLS VAWIERVTPQ AMAAACIKTE LVAPLTLFKA LRTQMDELGF APDYRIAALS
DLPEIASQHE P
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