| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_1634 |
|---|
| Symbol | |
|---|
| ID | 5154078 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 1709170 |
|---|
| End bp | 1710312 |
|---|
| Gene Length | 1143 bp |
|---|
| Protein Length | 380 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640556593 |
|---|
| Product | AraC family transcriptional regulator |
|---|
| Protein accession | YP_001237751 |
|---|
| Protein GI | 148253166 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.33217 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCACGACA TCGGTCTCAC GGCGCTGGAT CTCGGGCTGC GTGGTGCGGC CAGCGGCCTG
TTCACGATGA TGGTGCTCGT TCTGATCAGG CTCCGCCCGG CCAATCCCCA TGCCGTGCTC
GGCCTGGTGA TGTCGGCCGG CGGCGCCGGC TTTGCGATCG CGACCGCGCC GTTCATTCCG
ACCTCCACAT TCTGGTGGAC GCTGCCGCTG CTGTCGGCGC AGCCGGTCGT GTTCTGGCTA
TGGGCACGCG CCGCCTTCGA CGACGATTTC GCGCTCCGGC CCTGGCATGG CGCGGTCTGG
CTCGCCGTGG TCGTGCTGGG CTTCACAGCC TCGCTGAGCT GGCCGATATG GCCGGCTGTG
ACCAAGGCCT GCGCCAAGGG CCTGTCGGTC CTCGCGCTCG CGTTCGCGCT GCTCGCCATC
CTCCAGACGG TGACGACCTG GCGCGACGAT CTGGTCGCGC GACGACGGCT GCTGCGCATG
GCAGTCGTGA TCCTGAATCT CGGCTTCATT ACCTTCGTCG CCGGCCCCGC CCTGCTGCCG
CTGCCCGGCG CCGTGCTCGG CGCGGCGGCC AATAGCGGCG GCCTCGGCAG CTTCATCGTC
GCATTCACGC TGTGCATCCT GGCAATGCTG GCGAGTTGGA ACCTGTTCGG CGCCAACGCG
GTTGCGGCAT TGCCGACGCC AGCAGTGGTG GCAGCCAGCG TGGTCGATCC GCCGCAGGAC
ACAGAGCCTG GATTGAGCGA GCGGCCGGCG GTCGCGCCGC TGCTGCTGCG CCGGCTCGAT
CATCTCATGC GGGTGGAGCG CATCTATCGG CAGGAGGGAC TGTCGATCGG CGGGCTGGCC
GCCCAGCTCA ACGTGCCTGA ATATCGGTTG CGGCAGGCGA TCAATGAGGG GCTCGGCCAT
CGCAACTTCA GCGCGTTTCT GAATCGCTAC CGGCTCGACG ACGCCAAGGC GGCATTGTCG
GATCCAGGCC AGCGCGACGT GCCGATCCTG ACGATCGCGA TCGACGCCGG CTTCCAGTCG
ATCGGTCCAT TCAACCGCGC CTTCAAGGCC GCCACGGCGA TGACGCCGAG CGAATTTCGC
CGGCAGGCCC TCGTGGCGAC GGCCACGGAG ACCGAGAATC GCAGAATTCG GCAAGCCGAT
TGA
|
|---|
| Protein sequence | MHDIGLTALD LGLRGAASGL FTMMVLVLIR LRPANPHAVL GLVMSAGGAG FAIATAPFIP
TSTFWWTLPL LSAQPVVFWL WARAAFDDDF ALRPWHGAVW LAVVVLGFTA SLSWPIWPAV
TKACAKGLSV LALAFALLAI LQTVTTWRDD LVARRRLLRM AVVILNLGFI TFVAGPALLP
LPGAVLGAAA NSGGLGSFIV AFTLCILAML ASWNLFGANA VAALPTPAVV AASVVDPPQD
TEPGLSERPA VAPLLLRRLD HLMRVERIYR QEGLSIGGLA AQLNVPEYRL RQAINEGLGH
RNFSAFLNRY RLDDAKAALS DPGQRDVPIL TIAIDAGFQS IGPFNRAFKA ATAMTPSEFR
RQALVATATE TENRRIRQAD
|
|---|
| |