| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_1624 |
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| Symbol | |
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| ID | 5153287 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 1701179 |
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| End bp | 1702312 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640556585 |
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| Product | HlyD family secretion protein |
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| Protein accession | YP_001237743 |
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| Protein GI | 148253158 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGAAA CATCGAGCAA TGTTGACGCG GCATCGCGCA CGGCATCGAC ACCACCGTCC
TCTGCCGCGC CGACGGCAGG CCTATGGGCG CGTCTGGCCA TTCCGCTGCT CGCCGTGATC
GTCGCGCTGG CCTTCGTGGC GCTGGCGACC TTGCGCTGGA ACGCCTGGAC CGGCACTGCC
ACGACCCAGA CCACCAACGA CGCCTATGTC AGGGCCGACC TCACCCAGTT GTCGAGCCGC
GTCGCCGGCG AAGTGCTTAA GGTCGCGGTC AGCGACTTCC AGCGGGTCAA GGCCGGCGAC
CTGCTGATTC AGATCGATCC GGCCGATTAC GAGGCCCAGG TGTCGCAGGC CGAAGCCACC
GTGGAAGCGG CGCAGGCGGC GCTCGACAAT CTGAGCAATC AGATCGAGCT GCAATATGCG
ACGATTGCGC AAGCCGAGGC GCAGCAGGTG TCGGCCGGCG CCGCCGAGGT GCAGGCGCGG
CAGGAGGAGG AGCGCCAGCA ATCGCTGTCG CAGAGCGAGG CCGGCACCCG GCAGCGGCTG
GAGCAGGCCA CCGCCGCCTA TGCCAAGGCG CAGGCCGACG TCCGCGCGAG CCGCGCAGTG
ATTGCCGCGC AGCGCCATCA ACTTGAGGTG CTGACGGGCA CCAAGAAGCA GCGCGGCGCC
GACCTCGCCG GCGCCAAGGC CGCGCTCGCC GCCGCCCGCC TCAAGCTCGG CTATACCAGG
ATCACCGCGC CGTTCGACGG CGTCGTCGGA CAGCGCCAGG TGCAGGCCGG CGACTACGTC
AATGTCGGCA GCAGCCTGAT CGCGGTGGTT CCGCTGCCGC AGGTCTTCAT CGTCGCGAAC
TACAAGGAGA CGCAGCTCAC GCATGTGGCG CCGGGCCAGC CGGTCGACAT CACCGTCGAC
ACGTTCCCGG GCGAGCAGAT GCATGGCCGC GTCGAACGCA TCGCGCCGGC CTCCGGCTCG
CAATTCGCGT TGCTGCCGCC CGACAACGCG ACCGGCAATT TCACCAAGGT CGTGCAGCGC
ATTCCTGTGC GCATCGCCCT CGATCCGAAC CAGCCGCTGT TGGCGCGGCT GCTGCCGGGC
ATGTCGGTCG TGACCCATAT CCACACCGCT GGCCGCACCG ATGGCGCCAA GTGA
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| Protein sequence | MSETSSNVDA ASRTASTPPS SAAPTAGLWA RLAIPLLAVI VALAFVALAT LRWNAWTGTA
TTQTTNDAYV RADLTQLSSR VAGEVLKVAV SDFQRVKAGD LLIQIDPADY EAQVSQAEAT
VEAAQAALDN LSNQIELQYA TIAQAEAQQV SAGAAEVQAR QEEERQQSLS QSEAGTRQRL
EQATAAYAKA QADVRASRAV IAAQRHQLEV LTGTKKQRGA DLAGAKAALA AARLKLGYTR
ITAPFDGVVG QRQVQAGDYV NVGSSLIAVV PLPQVFIVAN YKETQLTHVA PGQPVDITVD
TFPGEQMHGR VERIAPASGS QFALLPPDNA TGNFTKVVQR IPVRIALDPN QPLLARLLPG
MSVVTHIHTA GRTDGAK
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