| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_1605 |
|---|
| Symbol | |
|---|
| ID | 5153304 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 1678253 |
|---|
| End bp | 1679347 |
|---|
| Gene Length | 1095 bp |
|---|
| Protein Length | 364 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640556567 |
|---|
| Product | putative phosphoenolpyruvate synthase (pyruvate, water dikinase) (PEP synthase) |
|---|
| Protein accession | YP_001237725 |
|---|
| Protein GI | 148253140 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0574] Phosphoenolpyruvate synthase/pyruvate phosphate dikinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGGGAACA GACGCATGGG CGCCAACGCA GCCGCATCCT TCATCGTGCC GTTCGAAGCC
GCATGCGCGG ACGACTTTCC GCGCATCGGC GGCAAATGCG CAAGCCTTGC GCGCATGATC
GCACAAGGCG TCCGCGTGCC CCAGGGCTTT GCGGTCACGA CCGACGCCTA CGCCCTGCAC
CTTCGAAGCA ACGGGCTCGC GGCCACGATC AGCGAGCGTC TGGCGCGGAT CGTGCTCGAC
GATGTGGATG ACGAAGAGAG GCTGTCGCAC GAGATCCGCG ATGCGATCGT GGCGCAGCCG
ATGCCGGCCG CGGTCGAGCA GTCGATCCGC GAGGCCTATC GCCGGATGTC GCCCGACGGC
CAGCTGCCGG TCGCGGTGCG CTCCTCCGCG ACCGCCGAGG ACCTGCCTGA TGCCAGCTTC
GCTGGCCAGC AGGACACCTA TCTCTGGGTG GTGGGCGAGG ACGCCGTGGT CGAGAAGGTC
AAGGCGTGCT GGGCCAGCCT GTTCAATGCC CGCGCCATCT CCTATCGCGC CGAGAACGGG
CTCGGGCAGA TCGACGTGCT GATGTCGGTG GGCGTCCAGA AGATGGTCAA TGCGTCAGCG
GCAGGCGTGG CGATGACGCT CGATCCGATC AACGGCGACC GCACCAAGAT TGTGATCGAT
TCCGCCTTCG GTCTGGGCGA GCCCGTGGTG TCCGGCGAGA TCACGCCTGA CAATTTCGTT
GTCGAGAAGG TGCTGCTGCA GGTGATCAAG CAGCGCATCT CCGAGAAGGA TTTCGAGCTT
GTGGCCGATC GCGCGGCGCG CCGAACCGTC GAGCGCGTGA TCGCCCCGGA GCGGCGCACG
CTGCCCTCGC TGACCAACGC CCAGGTGCTC GCCGTCGCCC GGCTCGCGAA GTCGCTCGAG
CGCAGCATGG GCTGTCCGCA GGATGTCGAA TGGGCGATCG ATGCCGATCT GCCGGAGGAC
GACAATCTCG TCGCGCTGCA GAGCCGGCCC GAGACGGTCT GGAGCCAGAA GAAAAAGCAG
ACGACGGCGG TCTACGAGAC CGGCATCGCC GGGGTGCTGG GGACGCTGCT CGCCCCGATC
CAGGCCAAGC GGTAA
|
|---|
| Protein sequence | MGNRRMGANA AASFIVPFEA ACADDFPRIG GKCASLARMI AQGVRVPQGF AVTTDAYALH
LRSNGLAATI SERLARIVLD DVDDEERLSH EIRDAIVAQP MPAAVEQSIR EAYRRMSPDG
QLPVAVRSSA TAEDLPDASF AGQQDTYLWV VGEDAVVEKV KACWASLFNA RAISYRAENG
LGQIDVLMSV GVQKMVNASA AGVAMTLDPI NGDRTKIVID SAFGLGEPVV SGEITPDNFV
VEKVLLQVIK QRISEKDFEL VADRAARRTV ERVIAPERRT LPSLTNAQVL AVARLAKSLE
RSMGCPQDVE WAIDADLPED DNLVALQSRP ETVWSQKKKQ TTAVYETGIA GVLGTLLAPI
QAKR
|
|---|
| |