| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_1604 |
|---|
| Symbol | |
|---|
| ID | 5153149 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 1676404 |
|---|
| End bp | 1678212 |
|---|
| Gene Length | 1809 bp |
|---|
| Protein Length | 602 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640556566 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001237724 |
|---|
| Protein GI | 148253139 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0574] Phosphoenolpyruvate synthase/pyruvate phosphate dikinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGCGC ACGCGAAATT CCCGAGCCCC TATGACCTGA AGACGCCCGT GGGCGCCGAG
GGCTGGGAGA AGCTCTATCC CTATTATCTG CAGTTCCAGA ACAGCCTGCG CGACAAGGAG
GACGGCAAAT TCTGGTTCTG CGACTCGCAG CACTGGCCGA GCCCGTTCAA GCCGTTCGAC
GCCGTCACCG TCGAGTTCGC CGTCAAATGC CTCGGCCAGT ACAACACCCG GCATTATCTG
ATCCCGCCGG CGAATGGCGT CGAATACCGC ATTCACAACG GCTATTGCTA CATGAGCCCG
GTCGCGGTCG CGCCGGAGCT GATCGGCGAC CGCGTGCCGC ATTTCATGGA GCGCGCCGGC
TACTACTTCC AGAACTGGGA TCGGCTGCTG GCCAATTGGG ACAAGAAGGT CCGTGCCAAC
ATCGCCGATC TCGAAGCGCT CAGCTTCGAG CCGCTGCCGG ACGCCGTGCC GCTCGACTGG
ATCACCGGCG GCGTCGGCCT CGACAACACC TATGCGCTGA CCGAGACCTA CGACCGGGCG
ATCCAGCTGC TCTACAAGAC CTGGCAGTAT CATTTCGAGT TTCTCAATCT CGGCTACGCC
GCCTATCTCG ACTTCTTCAG CTTCATGAAG GGGCAATTCC CCACCATTCC CGACCAGGCC
ATCGCCAAGA TGGTTCAGGG CGTGGAGGTC GACCTGTTCC GCCCCGACGA TGAGCTGAAG
AAGCTCGCCA AGCTCGCGGT GAAACTCGGG ATCGCCAGCG CGCTGAAGAG CGGCTCCGTC
GACGAGGCAC TGGCCGCCGT CAGCCGTGCA CCGAACGGCG CCGAATGGCT GAAGGCCTGG
AAGGAGGCGC AGGATCCCTG GTTCAACTTC ACCTCGGGCA ACGGCTTCTA CTCGACCGAC
AAATACTGGA TCGAGCATCT CGACATCCCG CTCGGCTATA TCAGGGACTA CATCGTCCGC
CTCGAACGCG GCGAGGAGAT CGACCGGCCG ACGGAAGCGA TCGCGCGGGA GCGCGACCGC
ATCACCTCGG AATATGCCGA GATGCTCGAC GCCGATGCCC GCGCCGCCTT CGAGGGCAAG
CTCGGGCTCG CCCGCACCGT GTTCCCCTAT GTCGAGAACC ACAATTTCTA CATCGAGCAT
TGGTCGATGA GCGTGTTCTG GCGCAAGATG CGCGAGCTCG GCGCCATCTT CCGCGATGCC
GGCTTCTGGA AGGACGCCGA CGACCTGTTC TACCTCAACC GCCAGGAAGT CCGCGACGCA
CTGTTCGACT ACGGCAATGG CTGGGCCGTC GGCGCGCCAG CGATCGGTCC GACCTACTGG
CCGCCGGAGA TCGAGCGGCG CAAGAAGATC ATGGCCGCGC TGGCGACCAC CCCGCCGCAG
CCCGCGCTCA ACAATCCGCC TGATGTCATC ACCGAGCCGT TCACGATCAT GCTCTGGGGT
ATCACCACAG AGAGCATCGG CCGCTGGCTC GACGGCGCCG CGAATACGAC CAAGCTGTCC
GGCATGGCCG CTTCGCCCGG CATCGTCGAG GGCCGCGCCC GCGTGGTGCG CTCGGCCGAC
GAGCTCGGGC AGATCGAACA GGGCGAGATC CTGGTCGCGC CGGTGACCGC GCCGAGCTGG
GCGCCGATCT TCGGCAAGAT CAACGCGATC GTCACCGACA TCGGAGGCAT GATGTCGCAC
GCCGCGATCG TCTGCCGCGA ATATGGACTG CCCGCCGTCA CCGGCACGGG GCGCGCGAGC
TCCTCGATCA AGAACGGACA GATGCTGCGC GTCAACGGTT CGACCGGCGA AGTCACCATC
CTCTCCTGA
|
|---|
| Protein sequence | MTAHAKFPSP YDLKTPVGAE GWEKLYPYYL QFQNSLRDKE DGKFWFCDSQ HWPSPFKPFD
AVTVEFAVKC LGQYNTRHYL IPPANGVEYR IHNGYCYMSP VAVAPELIGD RVPHFMERAG
YYFQNWDRLL ANWDKKVRAN IADLEALSFE PLPDAVPLDW ITGGVGLDNT YALTETYDRA
IQLLYKTWQY HFEFLNLGYA AYLDFFSFMK GQFPTIPDQA IAKMVQGVEV DLFRPDDELK
KLAKLAVKLG IASALKSGSV DEALAAVSRA PNGAEWLKAW KEAQDPWFNF TSGNGFYSTD
KYWIEHLDIP LGYIRDYIVR LERGEEIDRP TEAIARERDR ITSEYAEMLD ADARAAFEGK
LGLARTVFPY VENHNFYIEH WSMSVFWRKM RELGAIFRDA GFWKDADDLF YLNRQEVRDA
LFDYGNGWAV GAPAIGPTYW PPEIERRKKI MAALATTPPQ PALNNPPDVI TEPFTIMLWG
ITTESIGRWL DGAANTTKLS GMAASPGIVE GRARVVRSAD ELGQIEQGEI LVAPVTAPSW
APIFGKINAI VTDIGGMMSH AAIVCREYGL PAVTGTGRAS SSIKNGQMLR VNGSTGEVTI
LS
|
|---|
| |