Gene BBta_1527 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_1527 
Symbol 
ID5152037 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp1612794 
End bp1612964 
Gene Length171 bp 
Protein Length56 aa 
Translation table11 
GC content60% 
IMG OID640556492 
Productputative Flp/Fap pilin component 
Protein accessionYP_001237650 
Protein GI148253065 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3847] Flp pilus assembly protein, pilin Flp 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.713475 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.82875 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCGGCT GGCTTTCGAT CGACTCTGAG TCAGGTGTCA CCGCGATCGA ATATGGGCTT 
CTCGCCGCGC TGATCGCTGT CGTGATCATC GTGGGCGTGA CGCTCATCGG CACCAACCTC
CAGGCCATAT TCAACTACAT CGGCGGCAAG CTGAAGGTAC CTGGCACCTA G
 
Protein sequence
MAGWLSIDSE SGVTAIEYGL LAALIAVVII VGVTLIGTNL QAIFNYIGGK LKVPGT