| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_1516 |
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| Symbol | |
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| ID | 5152286 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 1603933 |
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| End bp | 1604922 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640556483 |
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| Product | putative Type II secretion system protein precursor |
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| Protein accession | YP_001237641 |
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| Protein GI | 148253056 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4965] Flp pilus assembly protein TadB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.397223 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0992648 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGCGTTCT GGAGAAAGCA ACCGAGGAAT AGACTCATGT CGTCCGTCAT CGGGTTGGCG
CTTGTTCTGC TGCTGATCGG CGGGGTCGTA CTGACGGCGG CGCTGCTGAT GGGCCGAAGA
ACACGCCTGG AGATAGAGAA ACGCGTGAAC CTTGTCGCTG GCAAAAGGGA GACGCCGGGG
TTCGCGGACG GGCTCGGCGA GCTGTTGAAA ACCAGAAAAT TCGACGCGCG GGTGCGGCGC
ATATTCACGA TCGGAATCAA ATACACTTGG GCAATGCGGT CCGGCGCGCT CAAGCTCCTG
CTAATAGCCG CCCTATCGGC CGGCGGGATG TGGTTCCTGA CTCAGCAGCT CCTCGGTCTC
TCGTCATTGC TCGCGGTGGC GGCGAGCGCG GCTGCGTCAT TCTTCGCGCC GCGCCTTCTT
CTTTCCCGGG AGCAGAAGCA GACCGAACGC ATGTTCGTCG ACTTGTTTCC GGACGCGGTC
GACACCGTCG CTCGCATGCT CCGGGCCGGC CTGCCGATCA CGGTGGCGAT GCGGACTGTC
GCTGTCGACG GATCCCCACC CGTCAGCAGA GTATTCGGCT TGATCGCCGA TGAGCTGCGA
ATTGGCGTTC CGCTCGAGGA AGCCCTGGAT ACAAACAGCC GGGAAATAGG GCTGCCGGAT
TTTCGCTTTT TTGCCGTAGC CATGACGCTG CAGTTTGCGA CCGGAGGCAA CCTCACGGCG
ACGCTGGAAA GTCTTTCCGA CATCATACGC AAACGCCGCG CGGCCCGCCT CAAGGCCAAA
GCCGCCACCG GTGAAATTCG CCTCACCGCT TATACTCTCG GAGCGATACC GATTCTGACC
ACCGGAGCGT TGCTCGTCGT CCAACCGCGC TATCTCACCC CCTTATGGAC GGACCCGCGC
GGCCATTTGA TTCTCGTGCT GGCTGGCGCT CTGTTGCTGC TATCGTTCCT TACGATGCGG
AAGATGATGC GCAGCGTAAC CAACGCGTGA
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| Protein sequence | MAFWRKQPRN RLMSSVIGLA LVLLLIGGVV LTAALLMGRR TRLEIEKRVN LVAGKRETPG
FADGLGELLK TRKFDARVRR IFTIGIKYTW AMRSGALKLL LIAALSAGGM WFLTQQLLGL
SSLLAVAASA AASFFAPRLL LSREQKQTER MFVDLFPDAV DTVARMLRAG LPITVAMRTV
AVDGSPPVSR VFGLIADELR IGVPLEEALD TNSREIGLPD FRFFAVAMTL QFATGGNLTA
TLESLSDIIR KRRAARLKAK AATGEIRLTA YTLGAIPILT TGALLVVQPR YLTPLWTDPR
GHLILVLAGA LLLLSFLTMR KMMRSVTNA
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