Gene BBta_1316 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_1316 
Symbol 
ID5148897 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp1404263 
End bp1404970 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content67% 
IMG OID640556300 
Producthypothetical protein 
Protein accessionYP_001237459 
Protein GI148252874 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.851569 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACTGGA GCGGACAGCG CTTCATCGAT CGCGACGAGC TCGCCGCATC GCGCCAGGTC 
ATCTGGCGTG ACGATGACGG CGTGACCGGT CTTGGCCTCG ATCCGAGCTT TGCGATTGGC
CAGCGCGCGC TGCTGATTCC CGAGCCCGAC GGCTGCGTGA TGTGGGACTG CGTTCCCCTG
GCGACGGAGA CCGCTGTCGC GCATGTGCGT TCGCGCGGCG GGCTGAAGGC CATCGCGGTC
TCGCATCCGC ATTTTTATGG CGCGGTAGCC GATTGGAGCG AGGCGTTCGG CGGCATCCCG
ATCTATCTCC ATGGCGACGA CAGCGCCTTC GTCACCCGGC CGCATCCCGC GATCGTGCCA
TGGACGGGCG ACAGCTTGCG GATCTCCGAC GCCGTCCGGC TCTATCGCAC CGGCGGTCAT
TTCCCCGGCG CCACCGTGCT GCATTGGCGG GAGGGCGCCG AGGGCAAGGG CGTGCTGTTC
ACCGGCGACA TCGCGATGGT CGCGATGGAC CGCCGCCACG TCAGCTTCAT GTATTCCTAC
CCGAACTATA TCCCGCTCGG CGCCGCAGCC GTGCGCAGGA TCGCCGCAAC GATCGGGCCG
CTCCCATTCG ATCGCATCTA CGGCGGGTGG TGGCAGAAGA ACATCGCAAC GGAAGCGAAG
CCCGCCTTCG AGCGGTCTGT CGCGCGCTAT CTCGCGGCAA TCGCCTGA
 
Protein sequence
MNWSGQRFID RDELAASRQV IWRDDDGVTG LGLDPSFAIG QRALLIPEPD GCVMWDCVPL 
ATETAVAHVR SRGGLKAIAV SHPHFYGAVA DWSEAFGGIP IYLHGDDSAF VTRPHPAIVP
WTGDSLRISD AVRLYRTGGH FPGATVLHWR EGAEGKGVLF TGDIAMVAMD RRHVSFMYSY
PNYIPLGAAA VRRIAATIGP LPFDRIYGGW WQKNIATEAK PAFERSVARY LAAIA