| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_1259 |
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| Symbol | |
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| ID | 5151398 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 1339112 |
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| End bp | 1340419 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640556246 |
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| Product | putative D-amino-acid dehydrogenase, FAD dependent |
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| Protein accession | YP_001237405 |
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| Protein GI | 148252820 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.00889371 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCAACAGA GTCAGAAGCC GCTGCGCATC GCAGTGATCG GCGCCGGCAT CGTCGGCGCC
GCCACGGCCT GGGAACTGAT CAAAGTCGGA CATGCCGTCA CGCTGATCGA GCCGGATGAG
CCCGGCGGAC CCCAGGCGGC GAGCTATGGA AACGGTGCCT GGATCAGCCC CGCGTCGATC
ATCCCGATGT CGATGCCCGG TCTCTGGCGC AAGGTGCCGG GCTATCTGCT CGATCCGAGC
GGACCGCTGG TGCTGCGTTG GACCGCGTTG CCTTCGCTGG CGCCGTGGCT GTTGCGCTTC
CTTGCAGCCG GTTGGACCGG TCAGAAGGTC GAGCATACGG CGGGCGTGCT CGCATCGATC
CTGGGCGATG GTCCGCAGCG CCATGCCCTG TTGGCGGAGG AGATCGGACG GCCCGATCTG
ATCCGTCGCA CCGGCCTGCT CTATGCTTAT CGCGATCGCG AGGCGTTCGA GGAGGAAGGT
CTCGCCTGGC GACTTCGAAA GGACAACGGG CTGCAATGGC GCGAGCTCGA ATCTGAGGAA
CTGCGGCGCC GCGAGCCGGA TCTCAGTCCC GGCTATCGCT TCGGCGTCCT GGTCGAGGAC
GGCGCGTATT GCGCCGACCC CGGCGCCTAT GTAGCTGCGA TCGTGCAGGC CGTGTGTGCG
CGAGGCGGGG TTCTCGTCCG CGCGCACGCC GACGGCTTCG TGCTGGCAAA CGGCCGTCTC
AAGGCGGTGA CGACCGATCG AGGCCAGGTC GACTGCGACC GAGCGGTGAT CTGCGGCGGC
ATCCGCTCCA AGGCGCTCGC GCGTGCCGCC GGCGATCGCG TCATGCTCGT GAGCGAGCGC
GGCTACCACG GCGTGATTGC GTCACCGCAG GCCGGCCCGC GATTTCCGAT CATGCCGAGC
GATGGACGAA TGGCCAACAC GCCGACCGCT GCCGGCCTGC GGCTCGCAGG CCAGGTCGAG
CTCACGCATG TCGATGCCGA GCCGGATTGG AGTCGCGTCG AGATCCTCGT CCAACACGCG
CTGAAGACCT ATCCGGCGCT GGGGCCACGC GAGCGCCTGA AAGTCGAGCG CTGGATGGGG
CATCGGCCCT CGACGCCGGA TGGCCGTCCG GTTATCGGAG CGTCCTCTGT ATCTCCCGAT
ATCTTCCACG CCTTCGGCCA TGGACATGTC GGCCTGGCAT CGGGCCCGAT CACGGGACGC
ATCATTGCCG ATCTCGTTGC GGGCAAGGAC GCGCCGGTCG ATATCAGGCC GTTCGCCGTA
TCGCGATTTA GCCGCTCGAG GTGGCGGATG GCATCGGGAG CCACATGA
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| Protein sequence | MQQSQKPLRI AVIGAGIVGA ATAWELIKVG HAVTLIEPDE PGGPQAASYG NGAWISPASI
IPMSMPGLWR KVPGYLLDPS GPLVLRWTAL PSLAPWLLRF LAAGWTGQKV EHTAGVLASI
LGDGPQRHAL LAEEIGRPDL IRRTGLLYAY RDREAFEEEG LAWRLRKDNG LQWRELESEE
LRRREPDLSP GYRFGVLVED GAYCADPGAY VAAIVQAVCA RGGVLVRAHA DGFVLANGRL
KAVTTDRGQV DCDRAVICGG IRSKALARAA GDRVMLVSER GYHGVIASPQ AGPRFPIMPS
DGRMANTPTA AGLRLAGQVE LTHVDAEPDW SRVEILVQHA LKTYPALGPR ERLKVERWMG
HRPSTPDGRP VIGASSVSPD IFHAFGHGHV GLASGPITGR IIADLVAGKD APVDIRPFAV
SRFSRSRWRM ASGAT
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