Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_1259 |
Symbol | |
ID | 5151398 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 1339112 |
End bp | 1340419 |
Gene Length | 1308 bp |
Protein Length | 435 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640556246 |
Product | putative D-amino-acid dehydrogenase, FAD dependent |
Protein accession | YP_001237405 |
Protein GI | 148252820 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.00889371 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCAACAGA GTCAGAAGCC GCTGCGCATC GCAGTGATCG GCGCCGGCAT CGTCGGCGCC GCCACGGCCT GGGAACTGAT CAAAGTCGGA CATGCCGTCA CGCTGATCGA GCCGGATGAG CCCGGCGGAC CCCAGGCGGC GAGCTATGGA AACGGTGCCT GGATCAGCCC CGCGTCGATC ATCCCGATGT CGATGCCCGG TCTCTGGCGC AAGGTGCCGG GCTATCTGCT CGATCCGAGC GGACCGCTGG TGCTGCGTTG GACCGCGTTG CCTTCGCTGG CGCCGTGGCT GTTGCGCTTC CTTGCAGCCG GTTGGACCGG TCAGAAGGTC GAGCATACGG CGGGCGTGCT CGCATCGATC CTGGGCGATG GTCCGCAGCG CCATGCCCTG TTGGCGGAGG AGATCGGACG GCCCGATCTG ATCCGTCGCA CCGGCCTGCT CTATGCTTAT CGCGATCGCG AGGCGTTCGA GGAGGAAGGT CTCGCCTGGC GACTTCGAAA GGACAACGGG CTGCAATGGC GCGAGCTCGA ATCTGAGGAA CTGCGGCGCC GCGAGCCGGA TCTCAGTCCC GGCTATCGCT TCGGCGTCCT GGTCGAGGAC GGCGCGTATT GCGCCGACCC CGGCGCCTAT GTAGCTGCGA TCGTGCAGGC CGTGTGTGCG CGAGGCGGGG TTCTCGTCCG CGCGCACGCC GACGGCTTCG TGCTGGCAAA CGGCCGTCTC AAGGCGGTGA CGACCGATCG AGGCCAGGTC GACTGCGACC GAGCGGTGAT CTGCGGCGGC ATCCGCTCCA AGGCGCTCGC GCGTGCCGCC GGCGATCGCG TCATGCTCGT GAGCGAGCGC GGCTACCACG GCGTGATTGC GTCACCGCAG GCCGGCCCGC GATTTCCGAT CATGCCGAGC GATGGACGAA TGGCCAACAC GCCGACCGCT GCCGGCCTGC GGCTCGCAGG CCAGGTCGAG CTCACGCATG TCGATGCCGA GCCGGATTGG AGTCGCGTCG AGATCCTCGT CCAACACGCG CTGAAGACCT ATCCGGCGCT GGGGCCACGC GAGCGCCTGA AAGTCGAGCG CTGGATGGGG CATCGGCCCT CGACGCCGGA TGGCCGTCCG GTTATCGGAG CGTCCTCTGT ATCTCCCGAT ATCTTCCACG CCTTCGGCCA TGGACATGTC GGCCTGGCAT CGGGCCCGAT CACGGGACGC ATCATTGCCG ATCTCGTTGC GGGCAAGGAC GCGCCGGTCG ATATCAGGCC GTTCGCCGTA TCGCGATTTA GCCGCTCGAG GTGGCGGATG GCATCGGGAG CCACATGA
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Protein sequence | MQQSQKPLRI AVIGAGIVGA ATAWELIKVG HAVTLIEPDE PGGPQAASYG NGAWISPASI IPMSMPGLWR KVPGYLLDPS GPLVLRWTAL PSLAPWLLRF LAAGWTGQKV EHTAGVLASI LGDGPQRHAL LAEEIGRPDL IRRTGLLYAY RDREAFEEEG LAWRLRKDNG LQWRELESEE LRRREPDLSP GYRFGVLVED GAYCADPGAY VAAIVQAVCA RGGVLVRAHA DGFVLANGRL KAVTTDRGQV DCDRAVICGG IRSKALARAA GDRVMLVSER GYHGVIASPQ AGPRFPIMPS DGRMANTPTA AGLRLAGQVE LTHVDAEPDW SRVEILVQHA LKTYPALGPR ERLKVERWMG HRPSTPDGRP VIGASSVSPD IFHAFGHGHV GLASGPITGR IIADLVAGKD APVDIRPFAV SRFSRSRWRM ASGAT
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