| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_1225 |
|---|
| Symbol | |
|---|
| ID | 5154379 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 1304046 |
|---|
| End bp | 1304417 |
|---|
| Gene Length | 372 bp |
|---|
| Protein Length | 123 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640556211 |
|---|
| Product | IS3/IS911 family transposase |
|---|
| Protein accession | YP_001237371 |
|---|
| Protein GI | 148252786 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2963] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.54899 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTTCGCAG GCGCAGGTCG CAAGCGCTGG CCGGATGATT TGAAGGCGCA GATTGCTGCG
GAAAGCCTCG AGCCGGGGGC GGTTGTCACA GACGTCGCCC GTCGCCATGG CTGCCGGCCC
CAGCAGGTGC ATGACTGGCG GCGCCGGGCG CGTTTGGGCC AATTGGTATT GCCGGCGTCG
GCGGACACGC TGTCGTTCGT GCCGGTGATG TCGGAATCGG CGTTGCCTGC GGCCGCAGAC
CCCTCCGGGT CGCCGGAAGC CGCCGTTGTG ACGGTTGAGT TCCAGGGCGC GCGCGTGGAG
GTGCGCGGGG CGCCTGGCCT TGCTGTATTG AGCGATGTGT TCATTGCGCT CCGCCGGACA
CGTTCATGCT GA
|
|---|
| Protein sequence | MFAGAGRKRW PDDLKAQIAA ESLEPGAVVT DVARRHGCRP QQVHDWRRRA RLGQLVLPAS
ADTLSFVPVM SESALPAAAD PSGSPEAAVV TVEFQGARVE VRGAPGLAVL SDVFIALRRT
RSC
|
|---|
| |