Gene BBta_1187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_1187 
Symbol 
ID5155663 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp1261223 
End bp1261885 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content65% 
IMG OID640556172 
Productputative methionine biosynthesis protein (MetW) 
Protein accessionYP_001237339 
Protein GI148252754 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID[TIGR02081] methionine biosynthesis protein MetW 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTGC AGGGTGTGTT GCCGCTGAAC GGCTTTTCCG GCGGCGAGGT GCTGGCCTAT 
CGGCCCGATC ATCTCCTGGT CGCCGGCATG GTCGAGCGCG GCTCCAAGGT GCTCGACATC
GGCTGCGGCG ACGGCGACCT GCTGCAGCTC CTGGAGAGTC GGGGCATTGA CGGCCGCGGC
ATCGAGCTGT CGCGCGAGGG CGTCAATCAC TGCGTCGCCA AGGGGCTCGC GGTGGTGCAG
GGCGACGCCG ATACCGATCT CGTCGACTAT CCCGACGATG CCTTCGACTA TGTGATCCTG
TCGCAGACGC TGCAGGCGAC GCGCCGGCCC AAGGCCGTGC TCGAGAACCT GCTGCGCATC
GGCCGCCGCG CCATCGTCAC GTTCCCGAAT TTCGGCTTCT GGCGGCTGCG CCTGCAATTG
CTCGTCGGCG GCCACATGCC GCGCACCGAC AATCTGCCCT TCACCTGGTA CGACACGCCC
AACATCCATT TCTGCACAAT CAAGGACTTC GTCCAGCTGT GCGACGAGAT CGGCGTGAAG
ATGGAGCGCG CCGTGGCTCT TGATAGTTAT GGCCGTCCGT TGCGCGTGGC CATGCCCTGG
TGGTTCTGGA ACATGTTCGG CGAGCAGGGC GTGTTTCTGC TGAGCAGAGG CGAGCGGCGG
TAG
 
Protein sequence
MSLQGVLPLN GFSGGEVLAY RPDHLLVAGM VERGSKVLDI GCGDGDLLQL LESRGIDGRG 
IELSREGVNH CVAKGLAVVQ GDADTDLVDY PDDAFDYVIL SQTLQATRRP KAVLENLLRI
GRRAIVTFPN FGFWRLRLQL LVGGHMPRTD NLPFTWYDTP NIHFCTIKDF VQLCDEIGVK
MERAVALDSY GRPLRVAMPW WFWNMFGEQG VFLLSRGERR