| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_1163 |
|---|
| Symbol | plcN |
|---|
| ID | 5155697 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 1238891 |
|---|
| End bp | 1241239 |
|---|
| Gene Length | 2349 bp |
|---|
| Protein Length | 782 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640556150 |
|---|
| Product | non-hemolytic phospholipase C precursor |
|---|
| Protein accession | YP_001237317 |
|---|
| Protein GI | 148252732 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3511] Phospholipase C |
|---|
| TIGRFAM ID | [TIGR03396] phospholipase C, phosphocholine-specific, Pseudomonas-type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAACAC GTCGCGATTT TCTCGCAGGC GCCACGGCGG CGGCTGCCTT CGCCAGTATC
CGTCAGGCAT TGGCCATTCC GGCGCGGCGC CGGACCGGCA CCATCCAGGA TGTCAAGCAT
GTGGTGATCC TGATGCAGGA GAACCGCTCC TTCGACCACT ATTTCGGCAC GCTGCGCGGT
GTGCGCGGCT TTGGTGATCG TTTCCCGATT CCGCTCGAGA GCGGCAAGCC GGTGTGGTTC
CAGTCCGACG GCACCCGCGA GATTCCGCCC TATCACCGCG ACTCCGCCAC CTCCAACGCG
CTGGTCGGCT ACGGCACGCC GCATTCCTTC GGCGACAGCC AGGCCGCCTG GAACCAGGGC
AAGATGGGCT ATTGGGCGAA GTACAAGACG CCCTATGCGA TGGGCTATTT CGGCCGCGAC
GACATTCCGT TCCAGTTCGC GCTCGCCGAG GCGTTCACGA TCTGCGACGC CTATCACGCC
TCGATCACCA CCGGCACCGA CCCGAACCGC ATCGTGTTCT GGTCCGGCTC CAACTTCAAC
CCGGCGCTGC GCGCTCAGGG CATCAACTGC ACCACGAACG ACGCCGAGCC CAACAATCTG
CGTTGCTGGC CGAATCCGCA TAATTGGGTG GCCGGCCAGC CGCAGCCGCA GGCTACTTAC
AAATATGTCG GCAGCGACTT CAACTGGGAC ACGCTGCCGG ATCTCTTGAA CAAGGCCGGC
GTCCGCTGGC ACATCTATCA GGACATGAAC GACAACTGGA CCGGCGCGAT GCATGGCTGC
CTCGCCTTCT CCAGTTTCCG CCACGCCCAG CCCGGCGATC CGAACTACGT GCACGGCCTG
ACCGGCGGTC CGGACTATCT CGATCGCCTC AAGGCCGACG TGATGGCCGG CACCCTGCCG
CAAGTGTCGT GGATCCTGCC GACCCAGGCC AATTCCGAGC ATCCCGGCGG CGGCAGCCCG
ACCCGTGCCG GCAATTTCAC CGACCAGGTG CTGGAAGCGC TGACGGCCAA TCCCGAGGTC
TGGAGCCAGA CCGTCTTCTT CCTCACCTTC GACGAGAATG ACGGCTTCTT CGATCATCTG
CCGGCGCCGG CGGTGCCGTC CTACGACGCG AGCGGCAAGC TGATGGGCAA GGCGACCTTG
CCGCTCGACG GCGAGTATTT CTCCAACACC GTCGGCAACG TCCTGACGGC GGCGGATACG
ATCAGCGGCA ACATCCGGCC CTGGGGCCTG TCGGCGCGCG TGCCGATGTA TGTGGTGTCG
CCGTGGAGCA AGGGCGGCTG GGTCAACTCG CAGGTGTTCG ACCACACCTC GGTCGGCCGC
TTCCTGGAGA AGCGCTTCGG CATCAAGGTC GAGGCCATCA GCCCGTGGCA TCGCGCCGTG
TCCGGCGATC TCACCTCGGC GTTCGACTTC GCCAGCCCCA ACGATCCGTG CTTCCCGGAA
CTGCCCGACC AGAGCAATTG GCAGGAGTCG GACGCGCATC AGAAGACCTT GCCGGCGCCG
GTCGCGCCCG CCACGCCGCA GCCGCTGTTC CAGGAAACCG GCGTGCGCTA TTCGCGCCCG
CTGCCCTACA TCCTGCACGC CACGTCGAAG GTCGATCCGG CCGGCGGCAA GGTGAAGCTC
TTGTTCGCCA ACACCGGCTT CGCCGGAGCG GTGTTCCACG TCTACGACAA GCTGCATCTC
GACCTCATTC CGCGGCGCTA CACGGTCGAG GCCGGCAAGA TGCTCGACGA CGAATGGAGC
GTCGGCAATG ATGGGCTGTA TGATCTCTGG GTGCTCGGCC CGAACGGCTT CCACCGTCAT
TTCAAGGGCG ACCTCGGCAA GGTGAAGCAG GCGCACGCCG CCAATCCCGA GATCTTCGTC
GGCTACAACG TCCATGATGG CGGCCTGCAC ATGCAACTGC GCAACGACGG CCATGGTCAC
CTGCACTTCA CGGTGCAGTC CAACGAGATC TACGGGCCGC TGCGCGCGGT CACCGCTGCA
ATCTCGGCTG CGCTGGAGCC GCAATGCCCC GGCTTCGGTC CGCAGCCCGG CTTCCATCCG
GTGGGCTTCG GCGCGGTGCC CGGCTTCCGT CCGGCTCCCG ACTTCGATGC GCCGGGCTTC
GGCTTCGGTG CGCCGAGCTT CTTCCCCGGA CCCAGCCATG GCGGTGCCGC CACGGAGTGG
GAGCTCAAAG TGTCCGGGCC GGGGCGCCCG AAGGAGCTGT ACTGGCATCT GCGCAAGTCG
GGACTGTGGT ACGATTTCGT CGTCACCAGC GACAGCGACG ACAGCTTCTA TCGCCGCGTC
GCAGGCCACG TCGAGACCGG CCGGCCGTCG TTCAGCGACC CCGGCATGGC GCTGGATGAT
TGCTTCTGA
|
|---|
| Protein sequence | MTTRRDFLAG ATAAAAFASI RQALAIPARR RTGTIQDVKH VVILMQENRS FDHYFGTLRG
VRGFGDRFPI PLESGKPVWF QSDGTREIPP YHRDSATSNA LVGYGTPHSF GDSQAAWNQG
KMGYWAKYKT PYAMGYFGRD DIPFQFALAE AFTICDAYHA SITTGTDPNR IVFWSGSNFN
PALRAQGINC TTNDAEPNNL RCWPNPHNWV AGQPQPQATY KYVGSDFNWD TLPDLLNKAG
VRWHIYQDMN DNWTGAMHGC LAFSSFRHAQ PGDPNYVHGL TGGPDYLDRL KADVMAGTLP
QVSWILPTQA NSEHPGGGSP TRAGNFTDQV LEALTANPEV WSQTVFFLTF DENDGFFDHL
PAPAVPSYDA SGKLMGKATL PLDGEYFSNT VGNVLTAADT ISGNIRPWGL SARVPMYVVS
PWSKGGWVNS QVFDHTSVGR FLEKRFGIKV EAISPWHRAV SGDLTSAFDF ASPNDPCFPE
LPDQSNWQES DAHQKTLPAP VAPATPQPLF QETGVRYSRP LPYILHATSK VDPAGGKVKL
LFANTGFAGA VFHVYDKLHL DLIPRRYTVE AGKMLDDEWS VGNDGLYDLW VLGPNGFHRH
FKGDLGKVKQ AHAANPEIFV GYNVHDGGLH MQLRNDGHGH LHFTVQSNEI YGPLRAVTAA
ISAALEPQCP GFGPQPGFHP VGFGAVPGFR PAPDFDAPGF GFGAPSFFPG PSHGGAATEW
ELKVSGPGRP KELYWHLRKS GLWYDFVVTS DSDDSFYRRV AGHVETGRPS FSDPGMALDD
CF
|
|---|
| |