Gene BBta_1129 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_1129 
Symbol 
ID5153387 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp1204502 
End bp1205230 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content65% 
IMG OID640556117 
Productputative isochorismatase hydrolase 
Protein accessionYP_001237284 
Protein GI148252699 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGCGC ATGCGGCCGG CTCGCGATTG CATGCAAAGG CAAGCGTGGC GGCTTCGCCG 
CCGCGCCTGC CCGATAGCAA TACAGGAGTG GATCTGCTCA TGAGCTCCGA CGCCACCGAC
AACTACAAGG GTGTCTATGA AAACCGCCTC GGCTTCGGCG GCCGTCCGGC CCTGATCCTG
ATCGATTTCG TGCAGGCCTA TTTCGAGCCG GTCTGCGACC TCTATGCCGA TGTGGACGAC
GCGTTGGCTG CCGCGATCCG GGTGCGCAAT GCCGCCCGCG CCGCCAGGGT TCCGGTGATC
TACACCAATG TCGTCTACCA TCAGCATGCC TTGAACGGCG GCCGCTTCTA TCAAAAGGCG
AAGCCGCTGC GGCACTTCCT GGCAGGGAGC CCGCTGGGCG CATGGCCCGC CGGCCTCGAC
GTCCGGGACG ACGAGCTCGT CGTCTCCAAA CAATATCCGA GCGCCTTTTT CGGCACCTCG
CTCGCCTCGA CGCTGACAAG CTGGGGCATC GACACCCTGA TCATCACCGG CCTCACCACC
AGCGGCTGCG TGAGGGCATC CTGCGTCGAT GCCTGCAGCC ACGGGTTCAT CCCGGTCGTC
GTCAGGGAGG CCTGCGGCGA TCGTCATCAG GGCCCGCATG AGGCCAATCT GTTCGACATG
AACGCGAAGT ATGCCGATGT CGTCAGCGAG CAGGACGCGC TGGCCTACAT CGCCGGCCTC
GCCAAATGA
 
Protein sequence
MTAHAAGSRL HAKASVAASP PRLPDSNTGV DLLMSSDATD NYKGVYENRL GFGGRPALIL 
IDFVQAYFEP VCDLYADVDD ALAAAIRVRN AARAARVPVI YTNVVYHQHA LNGGRFYQKA
KPLRHFLAGS PLGAWPAGLD VRDDELVVSK QYPSAFFGTS LASTLTSWGI DTLIITGLTT
SGCVRASCVD ACSHGFIPVV VREACGDRHQ GPHEANLFDM NAKYADVVSE QDALAYIAGL
AK