Gene BBta_1101 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_1101 
Symbol 
ID5152652 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp1173535 
End bp1174320 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content66% 
IMG OID640556090 
Producthypothetical protein 
Protein accessionYP_001237257 
Protein GI148252672 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.114229 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.139466 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCTCTG CGACTCAAGG TGTGCTGGGC CTGTTGTGCG GCGCGATGGT CGGGTTCTCG 
CTCGGTCTCG TCGGCGGCGG CGGCTCGGTG CTGGCGGTGC CGTTGATGGT CTATGTGGTC
GGCGTGCCGG AGCCGCATAT CGCGATCGGC TCCAGCGCGA TCGCAGTCGC CACCAATGCC
GCGGTCAACC TCGTCAATCA TGCCCGCGGC GGCACCGTGA TCTGGCCGAT CGCGGCGTTG
TTTGCTGTGG CTGGGATCGT CGGCGCGTTC GGCGGCTCGC TGCTCGGCAA GATGGTCGAC
GGCCAGAAGC TCCTGGCTTT GTTCGCGCTG GTGATGATGG TGATCGCCAT GCTGATGCTG
AAGACGCGCG CCCGCGTCGG CATTCCCGAC GTGAAGATGA GCATGGCCAA TTTTCCGGCC
ATTCTCGGCT TCGGGCTCGC CACCGGGACG CTGTCCGGCT TCTTCGGCAT CGGCGGCGGC
TTCCTGATCG TGCCGGCCTT GATGGCCGCG ACGGGCATGC CGATCATGAA TGCGGTGAGC
TCGTCGCTGG TGGCCGTCAC CACTTTCGGA CTGACCACCG CGGCGAGCTA CGCCTGGTCG
GGGCTCGTCG CCTGGGATCT GGCCGGCCTC TTTATCGCGG GTGGGATCGC CGGCGGCCTT
GCCGGCACCC GTCTGGCGCG CCATCTTGCC GAGCGGCGTG GCGCATTGAA CGTGGTGTTT
TCGATCGTGA TCGCGGCGGT GGCGCTTTAT ATGCTCACGC GCAGCCTATT GCATATCTGG
AGCTGA
 
Protein sequence
MISATQGVLG LLCGAMVGFS LGLVGGGGSV LAVPLMVYVV GVPEPHIAIG SSAIAVATNA 
AVNLVNHARG GTVIWPIAAL FAVAGIVGAF GGSLLGKMVD GQKLLALFAL VMMVIAMLML
KTRARVGIPD VKMSMANFPA ILGFGLATGT LSGFFGIGGG FLIVPALMAA TGMPIMNAVS
SSLVAVTTFG LTTAASYAWS GLVAWDLAGL FIAGGIAGGL AGTRLARHLA ERRGALNVVF
SIVIAAVALY MLTRSLLHIW S