Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_1101 |
Symbol | |
ID | 5152652 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 1173535 |
End bp | 1174320 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640556090 |
Product | hypothetical protein |
Protein accession | YP_001237257 |
Protein GI | 148252672 |
COG category | [R] General function prediction only |
COG ID | [COG0730] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.114229 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.139466 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCTCTG CGACTCAAGG TGTGCTGGGC CTGTTGTGCG GCGCGATGGT CGGGTTCTCG CTCGGTCTCG TCGGCGGCGG CGGCTCGGTG CTGGCGGTGC CGTTGATGGT CTATGTGGTC GGCGTGCCGG AGCCGCATAT CGCGATCGGC TCCAGCGCGA TCGCAGTCGC CACCAATGCC GCGGTCAACC TCGTCAATCA TGCCCGCGGC GGCACCGTGA TCTGGCCGAT CGCGGCGTTG TTTGCTGTGG CTGGGATCGT CGGCGCGTTC GGCGGCTCGC TGCTCGGCAA GATGGTCGAC GGCCAGAAGC TCCTGGCTTT GTTCGCGCTG GTGATGATGG TGATCGCCAT GCTGATGCTG AAGACGCGCG CCCGCGTCGG CATTCCCGAC GTGAAGATGA GCATGGCCAA TTTTCCGGCC ATTCTCGGCT TCGGGCTCGC CACCGGGACG CTGTCCGGCT TCTTCGGCAT CGGCGGCGGC TTCCTGATCG TGCCGGCCTT GATGGCCGCG ACGGGCATGC CGATCATGAA TGCGGTGAGC TCGTCGCTGG TGGCCGTCAC CACTTTCGGA CTGACCACCG CGGCGAGCTA CGCCTGGTCG GGGCTCGTCG CCTGGGATCT GGCCGGCCTC TTTATCGCGG GTGGGATCGC CGGCGGCCTT GCCGGCACCC GTCTGGCGCG CCATCTTGCC GAGCGGCGTG GCGCATTGAA CGTGGTGTTT TCGATCGTGA TCGCGGCGGT GGCGCTTTAT ATGCTCACGC GCAGCCTATT GCATATCTGG AGCTGA
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Protein sequence | MISATQGVLG LLCGAMVGFS LGLVGGGGSV LAVPLMVYVV GVPEPHIAIG SSAIAVATNA AVNLVNHARG GTVIWPIAAL FAVAGIVGAF GGSLLGKMVD GQKLLALFAL VMMVIAMLML KTRARVGIPD VKMSMANFPA ILGFGLATGT LSGFFGIGGG FLIVPALMAA TGMPIMNAVS SSLVAVTTFG LTTAASYAWS GLVAWDLAGL FIAGGIAGGL AGTRLARHLA ERRGALNVVF SIVIAAVALY MLTRSLLHIW S
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