| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_1072 |
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| Symbol | rfbD |
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| ID | 5152218 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 1113990 |
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| End bp | 1114892 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640556062 |
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| Product | TDP-rhamnose synthetase, NAD(P)-binding |
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| Protein accession | YP_001237230 |
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| Protein GI | 148252645 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1091] dTDP-4-dehydrorhamnose reductase |
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| TIGRFAM ID | [TIGR01214] dTDP-4-dehydrorhamnose reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAGTCGA CGCGGCTATA TGTCCTCGGA CGGCACGGGC AGGTCGCCAG GGCGCTCCAG
GAAGCATCCG AGGCGCAGCC TGACCTGGTC GTAGGCTTTG GCGGGCGCGA CGCGTTCGAT
ATCGCGGATA CCGATGCTGT CCTGCAGGCC TTGCACGGCT TCCAGCCTGA CATCGTGATC
AACCCCGCCG CCTATACGGC GGTCGATCGC GCGGAAGAGG ACGCGGCGGC CGCCTATCAT
GTCAACCGGG ATGGTGCGAG AGCGGTCGCT GAAGCAAGCG CGCGCCTGGA GATCCCGACC
ATCCATCTGT CGACCGACTA TGTTTTCGAC GGCGCGAAGC CGGCTCCCTA TGTGGAGGAT
GACGCGCCTG CTCCGATCAA CGTCTATGGT GCCTCGAAGC TTGCAGGCGA GCTTGCGGTC
GCCGCCGCGA ACCGCCGGCA TGTCATCCTG AGAACCGCCT GGGTGTATTC GCCATTCGGC
CAGAACTTCG TTCGGACGAT GCTCCGGCTT GCAAGCAGCC GCGACACGTT GCGGGTCGTG
AACGATCAGG TCGGCTGCCC GACCTCGGCA CTCGACATCG CGCGAGCCAT TCTTGCGATC
GCGCGCAGGA TCGACCGCGC CGGCTGGACG AACGAGTTTG GCGGCGTCAC GCATATTGCC
GGTCCCGACG TCGTCACGTG GTACGATTTC GCCTGCAGCA TCATGCGGGT CGCGGCCGCG
CACGGTGCGC GGACGGCGCG CATCGAGCCG ATCCCGACGC GCGATTATCC CACGCCGGCG
CGCCGGCCCG CCAATTCGCG CTTGTCATGC GATCGCCTGA CGGCGGTCTT TGGAGTTTCC
ATGCCGTCGC TTGAGGCATC ACTTTCGGAG TGCGTCTCGC GCCTGATCGC CACCGGAAGC
TGA
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| Protein sequence | MKSTRLYVLG RHGQVARALQ EASEAQPDLV VGFGGRDAFD IADTDAVLQA LHGFQPDIVI
NPAAYTAVDR AEEDAAAAYH VNRDGARAVA EASARLEIPT IHLSTDYVFD GAKPAPYVED
DAPAPINVYG ASKLAGELAV AAANRRHVIL RTAWVYSPFG QNFVRTMLRL ASSRDTLRVV
NDQVGCPTSA LDIARAILAI ARRIDRAGWT NEFGGVTHIA GPDVVTWYDF ACSIMRVAAA
HGARTARIEP IPTRDYPTPA RRPANSRLSC DRLTAVFGVS MPSLEASLSE CVSRLIATGS
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