Gene BBta_1056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_1056 
Symbol 
ID5151656 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp1101560 
End bp1102786 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content60% 
IMG OID640556047 
Producthypothetical protein 
Protein accessionYP_001237215 
Protein GI148252630 
COG category[S] Function unknown 
COG ID[COG2327] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.255193 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATGC AATCGCGACC GATGAAGATC GGAGTGTTTG GGAATTTCGG GATCGGCAAT 
TTCGGCAACG AGGCCACTTT CGCGGCCATG CTGGACACGC TGAAGCGCTT CAGGCCCGAC
GCGGAGTTGA CCTGCATCTG CACCAACCCT GACCAGGTCA GGCAGGATTA TGGGCTGCAG
GCCGTCCCGC TCAATACGGC CGGGCGATCA CCCCTCATGA GAAAGCTTTC CAACATCTGG
TACGCCATTG AGGTCGTCAG AAAGCTCGAC GTCCTGATCA TACCGGGCAC CGGCATTCTC
AACGACTATT GTGCTCCGCC CTTCGGGCTG CCCTATACGC TTTTCAGGTG GTGTCTCGCC
GCTCGTCTGT GCGGCACGCG TCTCGCCCTG GTCAGCATCG GAGCTGGTCC GCTGCATCAC
GGCTTGACGA AATGGTTCGT CCTGCGCTCT GCCGCGATGG CGACCTATCG CTCATACCGC
AACGAATTCT CGAAAAACTA TCTTGCCGGT CTCGGCTTTG ATGTGAGCAA CGATCCTGTC
TATCCGGACC TGGCATTTGC GCTCCCGATC CCCTCGGCGC CGCCCCAGGC CGCCCCGGCA
CAGCGTCTCA CCGTCTGTAT CGGCGCCATG CACTATCAGG GATGGCGCGG ACATCTGGAG
ACTGACGAGA ACATCTACGA AACCTATCTT GGCAAATTGA GAGATTTTGC TTTGTGGCTG
CTGGAGCGCG GCATGCGCGT CCAGTTGGTC ATGGGCGATG AACGCGACTG GAGGGCGGTG
TGCGACCTCC GCCAGGCGAT CTCGGCGGCG CGCCCATCAC TGCCGGACGA CCTTGTCGTG
GTGGAGCGGG CGGCCGGCTG GCAGGACGCG TTTCGGCAAT TGCGTGCTGC CGACATCGTG
GTGGCGACCA GGTTTCACAC CCTGGTGTTC GCACTGATGC TGGGAAAGCC GACCATCTCG
GTCGGCTATT CGGAGTATCA CGCAGAGCTG ATCGAGACGA TGGGGCTCGG AGGCTTCGCT
CAGCACAGCG AATCGATCGA TCTGGAGGTT CTGATCAACC AGTTCTCGGA GCTGTCCTCG
AACAGGGCCA AATACGAGCC GGTCATCATG CAGAGGGCAG AGACGGCGAG GAGCATGCTG
GCCGATCAGG AGCAGAAGGT GATGCATCGC TTGTTCGGCC AGTCTTCGCA GCCGCTGGGC
GCCACAAAAG ATGTTGCGGT CTCCTGA
 
Protein sequence
MTMQSRPMKI GVFGNFGIGN FGNEATFAAM LDTLKRFRPD AELTCICTNP DQVRQDYGLQ 
AVPLNTAGRS PLMRKLSNIW YAIEVVRKLD VLIIPGTGIL NDYCAPPFGL PYTLFRWCLA
ARLCGTRLAL VSIGAGPLHH GLTKWFVLRS AAMATYRSYR NEFSKNYLAG LGFDVSNDPV
YPDLAFALPI PSAPPQAAPA QRLTVCIGAM HYQGWRGHLE TDENIYETYL GKLRDFALWL
LERGMRVQLV MGDERDWRAV CDLRQAISAA RPSLPDDLVV VERAAGWQDA FRQLRAADIV
VATRFHTLVF ALMLGKPTIS VGYSEYHAEL IETMGLGGFA QHSESIDLEV LINQFSELSS
NRAKYEPVIM QRAETARSML ADQEQKVMHR LFGQSSQPLG ATKDVAVS