Gene BBta_1021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_1021 
Symbol 
ID5150761 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp1060191 
End bp1060832 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content62% 
IMG OID640556015 
Producthypothetical protein 
Protein accessionYP_001237183 
Protein GI148252598 
COG category 
COG ID 
TIGRFAM ID[TIGR02602] eight transmembrane protein EpsH (proposed exosortase)
[TIGR03113] exosortase 2 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCTGGGC TTTGCCTCCT GGTCCTGGCG CGCAACCAGG ATGTCTGGTT TCTCGAGGTC 
GCCTCGGAAA TCCCTGTCAT CGCCGGCCTC GTGTTGTTGC TCGCCGGCTG GCGGCTGCTG
CGGGTCCTGG CCTTCCCGAT CGGCTTCCTG ATCTTCTCGG CGCCTGCGCC AGGCTGGATG
GTGGATGCCG CAACGATCCC GCTCAAGGTG TTCATCTCGG ACTCTGTCAC GCAGTTGCTC
TACAGTGCCG GCTATCCGAT CGCCCAGAAC GGCGTCGTCA TTCTGATCGG CCCCTATCAA
CTCCTGGTGC AGGATGCGTG CTCGGGCCTG AACTCGATCT TCGTTCTCTC GGCGCTGGGC
GTCTTCTACG TCTACGCCTT CCGATGGAAC GAGAAGATCA GGGCGATCGC TCTGCTGCTC
CTGATCATCC CCATCACGGT GTTTGCGAAT TTCCTGCGGG TCACCTCGCT GGTGCTGATC
GCCTATTACG GCGGCGTCGA CAGGATGGAG GGACCGCTGC ACGATCTGAC CGGCGTCGCG
TTGTTCGTCG TGGCCGTGGT CCTGATGTTC CTGGCCGACG GCGCGATCAG TCTGCTGATG
AAGCTGTTCG GCCGGCGCAG CACGCGATTG GTCACGCCTT AG
 
Protein sequence
MSGLCLLVLA RNQDVWFLEV ASEIPVIAGL VLLLAGWRLL RVLAFPIGFL IFSAPAPGWM 
VDAATIPLKV FISDSVTQLL YSAGYPIAQN GVVILIGPYQ LLVQDACSGL NSIFVLSALG
VFYVYAFRWN EKIRAIALLL LIIPITVFAN FLRVTSLVLI AYYGGVDRME GPLHDLTGVA
LFVVAVVLMF LADGAISLLM KLFGRRSTRL VTP