Gene BBta_1016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_1016 
Symbol 
ID5150969 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp1056225 
End bp1057004 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content61% 
IMG OID640556010 
Producthypothetical protein 
Protein accessionYP_001237178 
Protein GI148252593 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG0489] ATPases involved in chromosome partitioning 
TIGRFAM ID[TIGR01007] capsular exopolysaccharide family 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.959397 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGTTCGA AAGACGCTTC GCTTGATCCA TTCACGCCCG AGGCTTCGGC GGGCGCCGAA 
ATCGTCTACC GTGAAGTCAA GCTCAGTGCG GCGCATCTCG AGGCCAAGCG GATCGTTGCC
CACGATCCGA TGCTGGAAAG CGGTCGCTAT TACGACATGC TGCGAACCCA GGTGCTGCAG
GCGATGGATG ACCAGGGCTG GCAGATCCTG GCCATTACCT CGCCGACGGC GGGCTGCGGC
AAGACGGTGA CCGCATGCAA CCTGGCCATG AGCATCGCCC GCCTGCCGGA GCGATCGGTG
CTGCTCATCG ACATGGATAT GATGAAGCCC AAGGTCGCCG ATTATCTCGG CATTGAGGCC
AAGAACGGCA TCCTGAGCGT GCTCCAGGTG CGGGCCGGAC TCAGCAGCAC GATGGTTCGG
ACCTCCATCC AGGACAATGA GTTGCTGGTT CTGCCTGGTG AAGTCTGCCG CTCCGGCTCG
GCCGAGTGGA TGGCGTCGCA GGCGATGACC TCGCTGATCG AGACCCTGAA GCGGGATTTC
AGGTCTTACG TGATCATCCT GGATCTGCCG CCCGTCCTGA TCGGCGACGA CGTGCTCGCG
ATCCTGCCCT GGCTGGAATC GATTCTGCTG GTCACCGCGG TGGGGACGTC CACGCTGCCA
GACATCAAGG AATGCTACAA GCACCTGAAG TCGGCTCCGA TCGTCCGTGT CCTGGTGAAC
AAGGTCTCAG AACGAACCGA AAGCTATTAC GGCTACGGCT ATCATTATGG GGCGAGCTGA
 
Protein sequence
MSSKDASLDP FTPEASAGAE IVYREVKLSA AHLEAKRIVA HDPMLESGRY YDMLRTQVLQ 
AMDDQGWQIL AITSPTAGCG KTVTACNLAM SIARLPERSV LLIDMDMMKP KVADYLGIEA
KNGILSVLQV RAGLSSTMVR TSIQDNELLV LPGEVCRSGS AEWMASQAMT SLIETLKRDF
RSYVIILDLP PVLIGDDVLA ILPWLESILL VTAVGTSTLP DIKECYKHLK SAPIVRVLVN
KVSERTESYY GYGYHYGAS