| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_1009 |
|---|
| Symbol | |
|---|
| ID | 5149722 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 1046740 |
|---|
| End bp | 1047972 |
|---|
| Gene Length | 1233 bp |
|---|
| Protein Length | 410 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640556003 |
|---|
| Product | glycosyl transferase family protein |
|---|
| Protein accession | YP_001237171 |
|---|
| Protein GI | 148252586 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.411292 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.902987 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGGATCAC CCGGTCGGCT CGCGGATGTT TTTTCGGATC GAAGGATGAG TTGGGTTTTT
GTTCCATTCC AGCTGTTGTC CGTTGCACTG GCGTGGGCCG TTCTCGTGCT GTTCGTTGAA
ATCGTCGCCG CTCACTTCGA GAGGAAGGGG GCCGCGACGA GGGAAGGCGC GCGCCCCCGC
GTCGTCGTGC TGATCCCTGC TCATAACGAG AGCCACGGCA TCGTTCCGAC CATCGGCGAT
ATCCGGTCGC AGCTCGGTTC AGGCGATCGC CTGCTCGTCG TGGCGGACAA TTGCAGCGAC
GACACCGCGG AGGTCGCGCT CGCCAGCGGT GCCGAGGTCA TTCGGCGGAA CGACGCGCAG
CACCGCGGTA AAGGGTTTGC ACTCGACTTT GGCCTTCGCA GCCTGGCCGC CGATGATCCG
GAGATTGTCA TCATCATCGA TGCGGATTGC CGTGTCGAGG ACGGGGCCAT CGACACACTC
GCTCGCGTCT GCAGCGCGAC GCAGCGGCCG ATCCAGGGCA TGTATCGGAT GTCGGCCCCG
CCGGGCGCTG CGGTCAATCA TCAGATTGCT GAGTTCGCGT GGCGCATCAA GAACGATCTG
CGCCCGCGCG GTCTGCGCGC CCTCGGCCTG CCTTGTCAGC TGATGGGAAG CGGCATGGCC
TTTCCGCGTT GCGCGCTTGC AAGCGTCAAC ATCGCATCCG GCCATCTGAC CGAGGATCTC
GAACTCGGGC TGTTGCTCGC CTCGGCCGGC CAGGCGCCGC TGTTCTGTCC GGCCGCGCAG
GTGCGCAGCG TCTTTCCCCT CACGGCAGCG GCCGCTCGGT CGCAGCGGCA ACGCTGGGAG
CATGGTCATC TCGCGATCCT GATCCGGCGG CTCTGCCCGC TCATGGGCAG AGCCCTGGCT
CAGCGCAATC GCGATCTGTT GGCCCTGAGC CTCGATGCGG CGGTGCCGCC CACCGTGCTT
CTCGGCCTGC TCACGCTCGT CGCCACGTTG ATCAACGGTG CAGCCGCCTT GCTGGGCGCG
GGCGCTGCTG CATTCCTCCT TGGCGTGGCA ACCATCACGA TGCTCGTTGC GGCGTTGCTT
TTGGCCTGGA ATGCGCGTGG CCGCGACCTC ATCACTGCGA GCGGCATTCG CGCGATCGGG
CCTTATCTCG CCGCCAAGGC CGGGATATAT GCACGGGCCT TCGCCGCGGA CAAAAAATGG
GTCAGAACCA AGCGCGGACG CGGCCAGGAA TGA
|
|---|
| Protein sequence | MGSPGRLADV FSDRRMSWVF VPFQLLSVAL AWAVLVLFVE IVAAHFERKG AATREGARPR
VVVLIPAHNE SHGIVPTIGD IRSQLGSGDR LLVVADNCSD DTAEVALASG AEVIRRNDAQ
HRGKGFALDF GLRSLAADDP EIVIIIDADC RVEDGAIDTL ARVCSATQRP IQGMYRMSAP
PGAAVNHQIA EFAWRIKNDL RPRGLRALGL PCQLMGSGMA FPRCALASVN IASGHLTEDL
ELGLLLASAG QAPLFCPAAQ VRSVFPLTAA AARSQRQRWE HGHLAILIRR LCPLMGRALA
QRNRDLLALS LDAAVPPTVL LGLLTLVATL INGAAALLGA GAAAFLLGVA TITMLVAALL
LAWNARGRDL ITASGIRAIG PYLAAKAGIY ARAFAADKKW VRTKRGRGQE
|
|---|
| |