Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_0998 |
Symbol | |
ID | 5149141 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 1035070 |
End bp | 1036437 |
Gene Length | 1368 bp |
Protein Length | 455 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640555992 |
Product | hypothetical protein |
Protein accession | YP_001237160 |
Protein GI | 148252575 |
COG category | [R] General function prediction only |
COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.238749 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.880315 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCAGC CCTCCCGTTC GCTCAAGCGG CGCATCTTGA ACGCCAGCGC ATGGACGGTC GCCGGCTATG GCAGCGCGCT GGTGCTCCGG CTTCTCGGCA ATCTGATCAT CGCCCGGCTC CTGGCGCCCG AGGCATTCGG CATCATGGCG GTGGCCACCT CGATCCAGCT CGTGATCGCA TTGACCGGCG ACATCGGTCT GCGGCAGGCC GTGATCCGCA GCCCCAACAT CCGCGAGCCC CGGTTCCTCC ACACCGCATG GACCGTGCAG ATCCTGCGCG GCCTGTCGAT CTGGATCTTC TGCGTGATCG CAGCGGCGGG CCTGTCAACG CTCGATCGTC TTGGAATCAT CACTGAGAAC TCCGTCTATG GCAACAAGGT GCTTCCCGCG ATCGTCGCCG TGACCTCCTT CTCGATCGTC ATCGACAGCC TTCAATCGAT GAGAGTGATG ACGATGGGAC GCGATTTGTC GCTCGCACGG CTGACGATCA TCGATCTCGG GCAAATGGTC GTCGGCCTAT GCGTGTCCGT CGTACTTGCC TGGTTTACTG GCTCCGTCTG GTGTTTCGTC GCCAGCTCCA TTGCGGGCTC AATCGTCAAT ACGGCAGCGG GCCATCTGTG GTTGAAGGGT GCCCCTGATC GGATCGCCTG GGACCGAGCT GCCTTGAATG AGCTGATGCA GTTCGGGAAA TGGGCTTCGA TCTCATCCTT TGTCGGCATC ATCGCCTCCC AGGGAAATCG GCTGTTACTC GGGATCTGGC TCACGCCGAC AAATCTCGGT CTGTTCTCGA TCGCATCGAA TCTCTCGTCC GTTGTCGACG GCATTGGTGG ACGGCTCTTC GGCGCAGTGT CCCTGCCCGC CCTCAGCGAG ATCGTGCACG AACAGCCGCA TCGCCTGCGT GAAGTGTTCT ATCGGATGCG GTGGGGCGCG GACGCGGCCT ACGTTGCCAG CGCCGGCTTC CTGTTCGCCT CAGGAAATTC CATCGTCGCA CTGCTCTACG ATCCGCGCTA CGCCGAGGCG GGTCCAATGC TGCAGCTTCT CTCGTTCTAT CTGTTGTTCT CGAGGTACGG CATCGTCCAG GACGTCTACA TCGCGCTTGG AAAAGCGAAC TATCTCACGG CGATCAACAT CACGAAATTG ATCTCCTTGT TCGTCGTCGT ACCGCTGCTC TACTATTTCT ATGGACAGAC CGGCGCCATC ATTGGCGCGG GACTGTATCT GATATCGATT GTGCCGCTGA TCTTCTGGCT AAATCGTTCT TATTCGCTGA ATAACTTCCG GTTCGAAATC CTGATCTTGG GCCTCTGGCC GATCGGATGG GGCGCGGGAC TGCTTGCCAA CGTGGCCATA GACATCCTCA AGCCCTGA
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Protein sequence | MTQPSRSLKR RILNASAWTV AGYGSALVLR LLGNLIIARL LAPEAFGIMA VATSIQLVIA LTGDIGLRQA VIRSPNIREP RFLHTAWTVQ ILRGLSIWIF CVIAAAGLST LDRLGIITEN SVYGNKVLPA IVAVTSFSIV IDSLQSMRVM TMGRDLSLAR LTIIDLGQMV VGLCVSVVLA WFTGSVWCFV ASSIAGSIVN TAAGHLWLKG APDRIAWDRA ALNELMQFGK WASISSFVGI IASQGNRLLL GIWLTPTNLG LFSIASNLSS VVDGIGGRLF GAVSLPALSE IVHEQPHRLR EVFYRMRWGA DAAYVASAGF LFASGNSIVA LLYDPRYAEA GPMLQLLSFY LLFSRYGIVQ DVYIALGKAN YLTAINITKL ISLFVVVPLL YYFYGQTGAI IGAGLYLISI VPLIFWLNRS YSLNNFRFEI LILGLWPIGW GAGLLANVAI DILKP
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