Gene BBta_0998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0998 
Symbol 
ID5149141 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp1035070 
End bp1036437 
Gene Length1368 bp 
Protein Length455 aa 
Translation table11 
GC content60% 
IMG OID640555992 
Producthypothetical protein 
Protein accessionYP_001237160 
Protein GI148252575 
COG category[R] General function prediction only 
COG ID[COG2244] Membrane protein involved in the export of O-antigen and teichoic acid 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.238749 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.880315 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCAGC CCTCCCGTTC GCTCAAGCGG CGCATCTTGA ACGCCAGCGC ATGGACGGTC 
GCCGGCTATG GCAGCGCGCT GGTGCTCCGG CTTCTCGGCA ATCTGATCAT CGCCCGGCTC
CTGGCGCCCG AGGCATTCGG CATCATGGCG GTGGCCACCT CGATCCAGCT CGTGATCGCA
TTGACCGGCG ACATCGGTCT GCGGCAGGCC GTGATCCGCA GCCCCAACAT CCGCGAGCCC
CGGTTCCTCC ACACCGCATG GACCGTGCAG ATCCTGCGCG GCCTGTCGAT CTGGATCTTC
TGCGTGATCG CAGCGGCGGG CCTGTCAACG CTCGATCGTC TTGGAATCAT CACTGAGAAC
TCCGTCTATG GCAACAAGGT GCTTCCCGCG ATCGTCGCCG TGACCTCCTT CTCGATCGTC
ATCGACAGCC TTCAATCGAT GAGAGTGATG ACGATGGGAC GCGATTTGTC GCTCGCACGG
CTGACGATCA TCGATCTCGG GCAAATGGTC GTCGGCCTAT GCGTGTCCGT CGTACTTGCC
TGGTTTACTG GCTCCGTCTG GTGTTTCGTC GCCAGCTCCA TTGCGGGCTC AATCGTCAAT
ACGGCAGCGG GCCATCTGTG GTTGAAGGGT GCCCCTGATC GGATCGCCTG GGACCGAGCT
GCCTTGAATG AGCTGATGCA GTTCGGGAAA TGGGCTTCGA TCTCATCCTT TGTCGGCATC
ATCGCCTCCC AGGGAAATCG GCTGTTACTC GGGATCTGGC TCACGCCGAC AAATCTCGGT
CTGTTCTCGA TCGCATCGAA TCTCTCGTCC GTTGTCGACG GCATTGGTGG ACGGCTCTTC
GGCGCAGTGT CCCTGCCCGC CCTCAGCGAG ATCGTGCACG AACAGCCGCA TCGCCTGCGT
GAAGTGTTCT ATCGGATGCG GTGGGGCGCG GACGCGGCCT ACGTTGCCAG CGCCGGCTTC
CTGTTCGCCT CAGGAAATTC CATCGTCGCA CTGCTCTACG ATCCGCGCTA CGCCGAGGCG
GGTCCAATGC TGCAGCTTCT CTCGTTCTAT CTGTTGTTCT CGAGGTACGG CATCGTCCAG
GACGTCTACA TCGCGCTTGG AAAAGCGAAC TATCTCACGG CGATCAACAT CACGAAATTG
ATCTCCTTGT TCGTCGTCGT ACCGCTGCTC TACTATTTCT ATGGACAGAC CGGCGCCATC
ATTGGCGCGG GACTGTATCT GATATCGATT GTGCCGCTGA TCTTCTGGCT AAATCGTTCT
TATTCGCTGA ATAACTTCCG GTTCGAAATC CTGATCTTGG GCCTCTGGCC GATCGGATGG
GGCGCGGGAC TGCTTGCCAA CGTGGCCATA GACATCCTCA AGCCCTGA
 
Protein sequence
MTQPSRSLKR RILNASAWTV AGYGSALVLR LLGNLIIARL LAPEAFGIMA VATSIQLVIA 
LTGDIGLRQA VIRSPNIREP RFLHTAWTVQ ILRGLSIWIF CVIAAAGLST LDRLGIITEN
SVYGNKVLPA IVAVTSFSIV IDSLQSMRVM TMGRDLSLAR LTIIDLGQMV VGLCVSVVLA
WFTGSVWCFV ASSIAGSIVN TAAGHLWLKG APDRIAWDRA ALNELMQFGK WASISSFVGI
IASQGNRLLL GIWLTPTNLG LFSIASNLSS VVDGIGGRLF GAVSLPALSE IVHEQPHRLR
EVFYRMRWGA DAAYVASAGF LFASGNSIVA LLYDPRYAEA GPMLQLLSFY LLFSRYGIVQ
DVYIALGKAN YLTAINITKL ISLFVVVPLL YYFYGQTGAI IGAGLYLISI VPLIFWLNRS
YSLNNFRFEI LILGLWPIGW GAGLLANVAI DILKP