Gene BBta_0980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0980 
Symbol 
ID5155253 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp1017146 
End bp1017835 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content69% 
IMG OID640555974 
Productputative extracellular metal-binding protein 
Protein accessionYP_001237142 
Protein GI148252557 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0725] ABC-type molybdate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.221383 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGTCA CCGCCGCCGG CATTTCTTCG ATGGCGACCA GGCAGATCCT CGCCGAGCTC 
GCGGCCGCCT ATGAGGAGGC GACCGGCGAC ATGATCACGA TCGAATCCGT CGGCGGCGTC
GATGCCGCCA AGCGCATTCG CGCCAGCGAG GCGTTCGACT TCGCGGTGCT CGCCTCGGAC
GCGCTGCAGA AGCTCGAGGC CGACGGCCAT CTCGTGCCCG GCAGCATCAT CGAGATCGCG
GAATCGCCGA TGGCGATGGC GGTGCGCGCA GGTCAGCCGA AGCCGGATCC GCTCGACGAA
GCCGCGGTGC GCAAGGCCAT GGAGGGCGCC AAGGCGATCG GCATCTCCAC CGGGCCCAGC
GGCACCCATG TGCAGAAGCT CGCCCGCGAT TGGGGTCTGG AGAGCGAGGG TGCCTCGCGC
CTGGTGCAGG CCAAGCCGGG CATTCCCGTC GCCAAGCTGT TGGCGGATGG CGAGGTCGAT
GTCGGCTTTC AGCAGCTCAG CGAGATGCTG GGCGCCCCCG GCATCGAGAT CGTCGGCCTG
CTGCCGGAAT CGCTGCAGCC GGGCACAGTG TTTGCCGCGG CGCTCTGCAA GGCGGCGGTG
CATCCCGACG CGGCGCGGGC CTTCATCGAA TATCTGGTGT CCGAGGAGAC GGCCGAGACC
AAGCGCCAGC ACGGGATGAC CCCGGTGTGA
 
Protein sequence
MSVTAAGISS MATRQILAEL AAAYEEATGD MITIESVGGV DAAKRIRASE AFDFAVLASD 
ALQKLEADGH LVPGSIIEIA ESPMAMAVRA GQPKPDPLDE AAVRKAMEGA KAIGISTGPS
GTHVQKLARD WGLESEGASR LVQAKPGIPV AKLLADGEVD VGFQQLSEML GAPGIEIVGL
LPESLQPGTV FAAALCKAAV HPDAARAFIE YLVSEETAET KRQHGMTPV