Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_0978 |
Symbol | |
ID | 5155421 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 1013805 |
End bp | 1014656 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640555972 |
Product | hypothetical protein |
Protein accession | YP_001237140 |
Protein GI | 148252555 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.479439 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.119821 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCTGT TCGTCATCGG CTTCGGCTAC ACCGCCCAAC GCGTCGTCGA TCTGCACGGC AGCGGCTTCT CGCGCATCAC CGGCACCGTG CGCAGCGCCG AGAAGCGCGC GCTGCTCGCG GCTGACGACA TTCACCTGTT CGACGGCACG CGGCCGGCGG ATGCGACCCT GGCCAAGGCG GCGCAGGCCG ACATCGTGCT GATCTCGGTG CCGCCGGGCT CCGGCGACGA TCCGGCGCTC ACGGCCTTTG GCGACGCGAT CACCACGGGC CGCGCGCGCC GGGTGATCTA TCTCTCCACC GTCGGCGTCT ATGGCGACCA TCAGGGCGCC TGGATCGACG AGGCGACGCC GCTGGCGCCC GAGCATGACC GGGTGCAGGC GCGGGTGCGC GTGGAGCAGG AGTGGCAGGC GCGGATCGGT GACCGGCTCA CGGTGCTCCG GCTCGGCGGC ATCTACGGCC CTGGCCGCAA CGCGCTGGTC GAGCTGCGCG CCGGCCGCGC TCGCCGCATC GTCAAGCCGG GCCAGGTGTT CAACCGCATC CATGTCGATG ACGCGGCGGC CGCGGTCATG GCAGCGGTCC GGTGCGGGAA AGGCGGTGCC TGGAACATCG TCGACGACGA GCCGGCGCCG CCGCAGGACG TCATCGCCTA CGCCGCAAAA CTGATGGGTG TCGCGCCGCC GCCGGAGCTC GCGTTCGACA GCGCCGAATT GTCGCCGATG GCGCGGAGCT TCTACGCCAG CAATCGGCGC ATCCGGAACA TCCGCGCCAA GCAGGAGCTC GGCCTGGTGT TCACCTACCC GACCTATCGG GCCGGGCTGG ACGCGCTATG GGCCGCCGGC GAAGGACGCT GA
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Protein sequence | MNLFVIGFGY TAQRVVDLHG SGFSRITGTV RSAEKRALLA ADDIHLFDGT RPADATLAKA AQADIVLISV PPGSGDDPAL TAFGDAITTG RARRVIYLST VGVYGDHQGA WIDEATPLAP EHDRVQARVR VEQEWQARIG DRLTVLRLGG IYGPGRNALV ELRAGRARRI VKPGQVFNRI HVDDAAAAVM AAVRCGKGGA WNIVDDEPAP PQDVIAYAAK LMGVAPPPEL AFDSAELSPM ARSFYASNRR IRNIRAKQEL GLVFTYPTYR AGLDALWAAG EGR
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