Gene BBta_0978 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0978 
Symbol 
ID5155421 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp1013805 
End bp1014656 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content71% 
IMG OID640555972 
Producthypothetical protein 
Protein accessionYP_001237140 
Protein GI148252555 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.479439 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.119821 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCTGT TCGTCATCGG CTTCGGCTAC ACCGCCCAAC GCGTCGTCGA TCTGCACGGC 
AGCGGCTTCT CGCGCATCAC CGGCACCGTG CGCAGCGCCG AGAAGCGCGC GCTGCTCGCG
GCTGACGACA TTCACCTGTT CGACGGCACG CGGCCGGCGG ATGCGACCCT GGCCAAGGCG
GCGCAGGCCG ACATCGTGCT GATCTCGGTG CCGCCGGGCT CCGGCGACGA TCCGGCGCTC
ACGGCCTTTG GCGACGCGAT CACCACGGGC CGCGCGCGCC GGGTGATCTA TCTCTCCACC
GTCGGCGTCT ATGGCGACCA TCAGGGCGCC TGGATCGACG AGGCGACGCC GCTGGCGCCC
GAGCATGACC GGGTGCAGGC GCGGGTGCGC GTGGAGCAGG AGTGGCAGGC GCGGATCGGT
GACCGGCTCA CGGTGCTCCG GCTCGGCGGC ATCTACGGCC CTGGCCGCAA CGCGCTGGTC
GAGCTGCGCG CCGGCCGCGC TCGCCGCATC GTCAAGCCGG GCCAGGTGTT CAACCGCATC
CATGTCGATG ACGCGGCGGC CGCGGTCATG GCAGCGGTCC GGTGCGGGAA AGGCGGTGCC
TGGAACATCG TCGACGACGA GCCGGCGCCG CCGCAGGACG TCATCGCCTA CGCCGCAAAA
CTGATGGGTG TCGCGCCGCC GCCGGAGCTC GCGTTCGACA GCGCCGAATT GTCGCCGATG
GCGCGGAGCT TCTACGCCAG CAATCGGCGC ATCCGGAACA TCCGCGCCAA GCAGGAGCTC
GGCCTGGTGT TCACCTACCC GACCTATCGG GCCGGGCTGG ACGCGCTATG GGCCGCCGGC
GAAGGACGCT GA
 
Protein sequence
MNLFVIGFGY TAQRVVDLHG SGFSRITGTV RSAEKRALLA ADDIHLFDGT RPADATLAKA 
AQADIVLISV PPGSGDDPAL TAFGDAITTG RARRVIYLST VGVYGDHQGA WIDEATPLAP
EHDRVQARVR VEQEWQARIG DRLTVLRLGG IYGPGRNALV ELRAGRARRI VKPGQVFNRI
HVDDAAAAVM AAVRCGKGGA WNIVDDEPAP PQDVIAYAAK LMGVAPPPEL AFDSAELSPM
ARSFYASNRR IRNIRAKQEL GLVFTYPTYR AGLDALWAAG EGR