Gene BBta_0974 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0974 
Symbol 
ID5155584 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp1010941 
End bp1011909 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content69% 
IMG OID640555968 
Producthypothetical protein 
Protein accessionYP_001237136 
Protein GI148252551 
COG category[R] General function prediction only 
COG ID[COG2070] Dioxygenases related to 2-nitropropane dioxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.461491 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAACAGA GTCCCATCGC CGAGCTGCGC GCGCGGCTGC GCCTGCCGCT GATTGCCGCA 
CCGATGTTCC TCGTGTCCGG CGTGGCGCTG GTGAGTGCGG CTTGCGTCCA TGGCGTGATC
GGCGCGTTCC CGACCGTGAA CTGCCGCACG CCTGAGGAGC TCGACGGCTG GCTGCGCGAG
ATCGAGAGCC GGACCTCACG CAGCTCAGAT GCCAGTGGCG TCGCGGCGGC GCCGGTCTGC
CCGAACCTGA TCGTGCATCG GTCCAACATG CGGCTGCAGG ACGATCTGGC GGTGCTGCTG
CGGCACCGTC CGGAGCTCGT GATCACCTCG GTCGGCTCGC CGGCGCCGGT GATCGCGCCG
TTGCACGATG CCGGCGCGCT GGTGTTGGCC GATGTCGCCT CGCTCCGGCA CGCGGAACGC
GCCGTCGAAG CGGGCGCCGA TGGTCTCGTG CTGCTGACGG CCGGCGCCGG TGGCCAGACC
GGCTGGCTCA ATCCGTTTGC CTTCGTGCGC GCCGTCCGGC GCTTCTTCGC GGGTCCCATC
GTGCTCGCCG GCGGCATCAG CGACGGCGTG GCGCTGCGTG CAGCCGAGAT GCTCGGCTGC
GATCTCGCTT ACATGGGCAC CAAGTTCATC GCCACGCATG AGAGCATGGC GGACGCGCGC
TACAAAGCGA TGTTGGTCGA GAGCTCGGCC GATGACGTGC TGCTGACCTC CGCCGTCACC
GGCCTGCCGA CCAGCATGCT TCGTCCTTCG CTGCTCGCCG CCGGGCTCGA CCCGGACAAT
CTGCCGGCGC GTGGCGCGAT CGAGATCGGC AACGACATCG ATATCGACGC GCGCGCGGCG
CGGCCAAAGC GCTGGCGCGA CGTCTGGAGC GCGGGCCATT CGACCTCGGG TGTCACCGAT
ATTCTGTCAG TTGCGGCGCT GATCGATCGC ACGACTGATG AGTATCGTGG TGGCAAACAG
GTATTTTGA
 
Protein sequence
MQQSPIAELR ARLRLPLIAA PMFLVSGVAL VSAACVHGVI GAFPTVNCRT PEELDGWLRE 
IESRTSRSSD ASGVAAAPVC PNLIVHRSNM RLQDDLAVLL RHRPELVITS VGSPAPVIAP
LHDAGALVLA DVASLRHAER AVEAGADGLV LLTAGAGGQT GWLNPFAFVR AVRRFFAGPI
VLAGGISDGV ALRAAEMLGC DLAYMGTKFI ATHESMADAR YKAMLVESSA DDVLLTSAVT
GLPTSMLRPS LLAAGLDPDN LPARGAIEIG NDIDIDARAA RPKRWRDVWS AGHSTSGVTD
ILSVAALIDR TTDEYRGGKQ VF