Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_0960 |
Symbol | |
ID | 5151742 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 994252 |
End bp | 995220 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640555954 |
Product | putative dioxygenase |
Protein accession | YP_001237122 |
Protein GI | 148252537 |
COG category | [R] General function prediction only |
COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.428821 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCATGC CCGCCTTGTT CAAGGGGCGC CTGTCGATCC CCGTGATCGG CTCGCCATTG TTCATCATCT CCGTGCCCGA CCTGGTGATC GCGCAGTGCA AGGCCGGCGT GGTCGGGTCA TTCCCTGCGC TGAACGCGCG GCCGGCGGCG CTGCTCGACG AATGGCTGGC GCGCATCACC GAGGAGCTCG CCGCCTATGA CCGCGCGCAT CCGGAACGTC CCTCGGCGCC GTTCGCGGTC AATCAGATCG TGCACCGCTC CAACAACCGG CTCGAGCAGG ATCTGGCGCT GTGCGAGAAG TACAAGGTGC CGATGATGAT CACCTCGCTC GGCGCGCGCG AGGAGCTCAA TCAGGCGGCG CATCGCTGGG GCGGCATCGT CTTCCACGAT GTGATCAACC AGACCTTCGC CCACAAGGCG ATCGAGAAGG GCGCCGACGG CCTGATCCTG GTCGCGGCCG GCGCCGGCGG CCATGCCGGC ACCATCTCGC CGTTCGCCTT CGTCGCGGAG ACGCGCAGCT GGTTCGATGG ACCGATCGCG TTGTCCGGTG CGATTGCCAA TGGCCGCGCC ATCCGCGCCG CGCGTGTGCT GGGCGCCGAC TTCGCCTATA TCGGCTCCGC CTTCATCGCC ACCAAGGAAG CGAACGCGGT GGAAGGCTAC AAGCAGATGA TCACCAGTTC GGGCGCCGAC GATATCGTCT ATTCGAACCT GTTCACCGGC GTGCATGGCA ACTACCTGAA GCCGTCGATC GTCGCCGCCG GGCTTGATCC CGACAATCTG CCGACCTCGG ACCCGTCGAA GATGAGCTTC GGCACCGATG CCTCGGGCGA GCGCGCCAAG CCGAAGGCCT GGAAGGAGAT CTGGGGCTCG GGCCAGGGCA TCGGCGCCAT CAAGGACGTC CTCCCGGCCG CCGAGCTGAT CGCCCGTTTC AAGAAGGAAT ATGACGAGGC GATCGACCCG CCGCTCTAA
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Protein sequence | MSMPALFKGR LSIPVIGSPL FIISVPDLVI AQCKAGVVGS FPALNARPAA LLDEWLARIT EELAAYDRAH PERPSAPFAV NQIVHRSNNR LEQDLALCEK YKVPMMITSL GAREELNQAA HRWGGIVFHD VINQTFAHKA IEKGADGLIL VAAGAGGHAG TISPFAFVAE TRSWFDGPIA LSGAIANGRA IRAARVLGAD FAYIGSAFIA TKEANAVEGY KQMITSSGAD DIVYSNLFTG VHGNYLKPSI VAAGLDPDNL PTSDPSKMSF GTDASGERAK PKAWKEIWGS GQGIGAIKDV LPAAELIARF KKEYDEAIDP PL
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