Gene BBta_0960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0960 
Symbol 
ID5151742 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp994252 
End bp995220 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content66% 
IMG OID640555954 
Productputative dioxygenase 
Protein accessionYP_001237122 
Protein GI148252537 
COG category[R] General function prediction only 
COG ID[COG2070] Dioxygenases related to 2-nitropropane dioxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.428821 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCATGC CCGCCTTGTT CAAGGGGCGC CTGTCGATCC CCGTGATCGG CTCGCCATTG 
TTCATCATCT CCGTGCCCGA CCTGGTGATC GCGCAGTGCA AGGCCGGCGT GGTCGGGTCA
TTCCCTGCGC TGAACGCGCG GCCGGCGGCG CTGCTCGACG AATGGCTGGC GCGCATCACC
GAGGAGCTCG CCGCCTATGA CCGCGCGCAT CCGGAACGTC CCTCGGCGCC GTTCGCGGTC
AATCAGATCG TGCACCGCTC CAACAACCGG CTCGAGCAGG ATCTGGCGCT GTGCGAGAAG
TACAAGGTGC CGATGATGAT CACCTCGCTC GGCGCGCGCG AGGAGCTCAA TCAGGCGGCG
CATCGCTGGG GCGGCATCGT CTTCCACGAT GTGATCAACC AGACCTTCGC CCACAAGGCG
ATCGAGAAGG GCGCCGACGG CCTGATCCTG GTCGCGGCCG GCGCCGGCGG CCATGCCGGC
ACCATCTCGC CGTTCGCCTT CGTCGCGGAG ACGCGCAGCT GGTTCGATGG ACCGATCGCG
TTGTCCGGTG CGATTGCCAA TGGCCGCGCC ATCCGCGCCG CGCGTGTGCT GGGCGCCGAC
TTCGCCTATA TCGGCTCCGC CTTCATCGCC ACCAAGGAAG CGAACGCGGT GGAAGGCTAC
AAGCAGATGA TCACCAGTTC GGGCGCCGAC GATATCGTCT ATTCGAACCT GTTCACCGGC
GTGCATGGCA ACTACCTGAA GCCGTCGATC GTCGCCGCCG GGCTTGATCC CGACAATCTG
CCGACCTCGG ACCCGTCGAA GATGAGCTTC GGCACCGATG CCTCGGGCGA GCGCGCCAAG
CCGAAGGCCT GGAAGGAGAT CTGGGGCTCG GGCCAGGGCA TCGGCGCCAT CAAGGACGTC
CTCCCGGCCG CCGAGCTGAT CGCCCGTTTC AAGAAGGAAT ATGACGAGGC GATCGACCCG
CCGCTCTAA
 
Protein sequence
MSMPALFKGR LSIPVIGSPL FIISVPDLVI AQCKAGVVGS FPALNARPAA LLDEWLARIT 
EELAAYDRAH PERPSAPFAV NQIVHRSNNR LEQDLALCEK YKVPMMITSL GAREELNQAA
HRWGGIVFHD VINQTFAHKA IEKGADGLIL VAAGAGGHAG TISPFAFVAE TRSWFDGPIA
LSGAIANGRA IRAARVLGAD FAYIGSAFIA TKEANAVEGY KQMITSSGAD DIVYSNLFTG
VHGNYLKPSI VAAGLDPDNL PTSDPSKMSF GTDASGERAK PKAWKEIWGS GQGIGAIKDV
LPAAELIARF KKEYDEAIDP PL