| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_0938 |
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| Symbol | |
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| ID | 5148962 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 971665 |
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| End bp | 973758 |
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| Gene Length | 2094 bp |
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| Protein Length | 697 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640555932 |
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| Product | C4-dicarboxylate transporter |
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| Protein accession | YP_001237100 |
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| Protein GI | 148252515 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4666] TRAP-type uncharacterized transport system, fused permease components |
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| TIGRFAM ID | [TIGR02123] TRAP transporter, 4TM/12TM fusion protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.944103 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAACGC CTGTGAAGGT CGAGTTCGAC AATTTCGAAC ACGGCTTTCC GGAGGGATTC
GGCCCCGGCC GCTGGGGCTA TCTCGCTTAC GGCATCGGCC TCGCTTTCGC ACTGTTCCAG
CTCTATGTCG CCGCCTTCAA TTATCTGCCG AGCCAGGTGG TGCGCGGCGT CCATGTCGGC
TTCCTGCTGC TGCTCACCTT CGGCCTGATC GGCAATTTCA CCGCCAAGAC CGATGCCGGA
CGCATCGCCG GCTGGGCCAT CGGCGCCATC GGCTTCAGTT GCGGACTTTA CCAGTGGATC
TTCTACGCCG ATCTGATCGC GCGTGACGGC GATCCGACCC GCGCCGACCT CGTGGTCGGA
ACCTTGCTCG CCGTGCTGAT TTTCGAGGGC ACCCGTCGCC TGATGGGTCT GGCACTGCCG
CTGATGTGCG GCGCCTGCCT GTTGTACTGG TTCTTCGGCC AGTATCTGCC GGCGCCGCTC
AACCATCGCG GCTATGATTT CGATCAGGTC ATTACCCATC TGTCGTTCGG CACCGAGGGC
TTCTACGGCG TGCCGATCTA CGTCTCGGCC ACCTACATCT TCCTGTTCAT CCTGTTCGGA
TCGTTCCTCG AACATGCCGG TATGATTCAG CTGTTCACCG ACGTCTCGCT TGGCCTGTTC
GGGCGCACGC GGGGCGGTCC GGCCAAGGTT GCGGTGTTCG CCTCGGGCAT GATGGGCACG
ATCTCCGGCT CCGGCGTCGC CAATGTCGTC ACTGTCGGCC AGTTCACGAT TCCGCTGATG
ATCCGGTTCG GCTACCGCCG CGCCTTCGCT GCCGGCGTCG AGGCCACGGC CTCGATGGGC
GGCCAGATCA TGCCGCCGGT GATGGGCGCG GTGGCCTTCA TCATGGCCGA GACTCTCGGC
GTCGACTATT CGGTGATCGT CAAGGCCGCC GTGATCCCGG CCATCCTGTA TTTCGCCTCG
GCGTTCTGGA TGGTGCATCT GGAGGCCGGC AAGCATGGCC TGACCGGTAT GAAGCCGTCG
GAGATCCCGA GCGCGTGGAA GGCGCTGGTC GCCCGCTGGT ATCTCGTGCT GCCGCTGGCC
GCACTGGTCT ACATGCTGTT CGAGGGCTTC ACGCCGCTCT ATGCCGGCTC CATGGGACTG
GCGCTGACGG TGGCGCTGAT CCTGGGCACC TCGATCACGA TGGGCTTCTC CAACCAGGTG
CTGCGCTACG TGTTCTGGAT CGGGCTGGCG CTCGTGGTCG GCGCGCTGTC GCGCAACGGG
CTGCAGATCG TGCCGGTCGC CTCCGTGGTC GTCGCGCTCG TCGTGATCAC CGGCTTCGTG
CGCGGCGGCA TGGCGACCTT GCATGCGTGC CGCGACTCGC TCGCCGAAAG CGCCAAGTCG
GCGCTGACCG TCGGCATGGC CTGCGCCATC GTCGGCGTCA TCATCGGCAT GATGACCCAG
ACCGGCGTCG GCTCGATCTT CGGCAGCTGG GTGATCGGCC TCGGCAAGAC CAGCCTGTTC
GCGGCGCTGA TCATGACCAT GCTGCTGTCG ATCCTGCTCG GCACGGGCAT TCCGACCATC
CCGACCTACA TCATCACCGC GGCGCTGGCG GCGCCCGCGC TCGCCAAGCT CGGCGTGCCG
CTGATCGCCA GCCACATGTT CGCGTTCTAC TACGGGATCA TGGCCGACCT CTCGCCGCCG
GTGGCGCTGG CGGCGCTGGC CGCCGCGCCG ATCGCCAAGG AGAACCCGGA CAAGATCGGC
TGGGAGGCGA TGCGGATCGC GCTGGCCGGC TACGTCATTC CCTTCATCTT CGTCTACTCG
CCGGCGCTGA TGCTGCAGGC CGGCGACCCG ATGGAGGCGC AACTCGGCTT TCTCGGCGCG
GTGGCCTATG CCGGCGTCAA GGCCCTGGTC TCGATCGGCC TGTTCGGCAT GGTCGCGATC
GGCTTTTTGT TCACGCGCAT GACCGTGATC GAGCGTCTGC TGTCCTTCGT CGCATCGGTC
TGTCTGCTCG GCGAATTCCC CTATAGCGAC GTGCTGGGCT TCGTCCTGGC CGTGGCGATC
GTCGCGTGGC AGTGGCGGCA GCGGCCGCCT GCGGCCGTGG TGGTCTCAGC TTGA
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| Protein sequence | METPVKVEFD NFEHGFPEGF GPGRWGYLAY GIGLAFALFQ LYVAAFNYLP SQVVRGVHVG
FLLLLTFGLI GNFTAKTDAG RIAGWAIGAI GFSCGLYQWI FYADLIARDG DPTRADLVVG
TLLAVLIFEG TRRLMGLALP LMCGACLLYW FFGQYLPAPL NHRGYDFDQV ITHLSFGTEG
FYGVPIYVSA TYIFLFILFG SFLEHAGMIQ LFTDVSLGLF GRTRGGPAKV AVFASGMMGT
ISGSGVANVV TVGQFTIPLM IRFGYRRAFA AGVEATASMG GQIMPPVMGA VAFIMAETLG
VDYSVIVKAA VIPAILYFAS AFWMVHLEAG KHGLTGMKPS EIPSAWKALV ARWYLVLPLA
ALVYMLFEGF TPLYAGSMGL ALTVALILGT SITMGFSNQV LRYVFWIGLA LVVGALSRNG
LQIVPVASVV VALVVITGFV RGGMATLHAC RDSLAESAKS ALTVGMACAI VGVIIGMMTQ
TGVGSIFGSW VIGLGKTSLF AALIMTMLLS ILLGTGIPTI PTYIITAALA APALAKLGVP
LIASHMFAFY YGIMADLSPP VALAALAAAP IAKENPDKIG WEAMRIALAG YVIPFIFVYS
PALMLQAGDP MEAQLGFLGA VAYAGVKALV SIGLFGMVAI GFLFTRMTVI ERLLSFVASV
CLLGEFPYSD VLGFVLAVAI VAWQWRQRPP AAVVVSA
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