Gene BBta_0897 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0897 
SymbolhisD 
ID5152187 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp932226 
End bp933521 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content69% 
IMG OID640555892 
Producthistidinol dehydrogenase 
Protein accessionYP_001237061 
Protein GI148252476 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0141] Histidinol dehydrogenase 
TIGRFAM ID[TIGR00069] histidinol dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCATTC GCCTGTCCCG CGCTCACGCC GATTTCGACG CCCAGTTTCG GCAGTTTCTC 
GCCGCCAAGC GCGAGACCTC CGCCGACGTC GAAGCCGCCG CCCGCGCCAT CGTCGATGAC
GTCGCCAAAC GCGGCGACGC GGCGCTGCTC GAGGCGACCC GCAAGTTCGA TCGGCTGGAG
CTGACCGCGG CCTCGCTGCG CGTCACCGCG GACGAGATCG AGGCCGCGGT GACGGCCTGT
GATGCTGCGA CATTGGACGC GCTGAAATTC GCCCGCGACC GCATCGAAGC CTTCCATCTC
AAGCAGCTGC CGCAGGACCA GCGCTTCACC GACGCCGCCG GGGTCGAACT CGGCTGGCGC
TGGAGCGCGA TCGAATCCGC CGGTCTTTAT GTGCCCGGCG GCACCGCGGC CTATCCATCC
TCGGTGCTGA TGAACGCCAT CCCCGCCAAG GTTGCCGGCG TCAGCCGGCT GGTGATGGTG
GTGCCGGCGC CCGACGGCAA GCTCAATCCG CTGGTGCTCG CCGCCGCGCA TCTCGGCGGC
GTCTCCGAGA TCTACCGCGT CGGCGGCGCC CAGGCGGTCG CCGCGCTGGC GCATGGCACC
GCGACGATCG CCCCGGTCGT CAAGATCGTC GGGCCCGGCA ATGCCTATGT CGCCGCCGCC
AAGCGGCTGG TGTTCGGCAA GGTCGGCATC GACATGATCG CCGGCCCGTC CGAGGTGCTG
GTCATCGCCG ACGACAGCGG CAATGCCGAC TGGATCGCCG CCGATCTCCT GGCCCAGGCC
GAGCACGACG CCAGCGCGCA ATCGATCCTG ATCACCGACA GCCGCCGCCT GGCCGACGAC
GTCGCCCGCG CCGTCGAAGG CCAGCTCAAG ACGCTGCCGC GCGCTCAGAT CGCCGGCGCG
TCCTGGGCCG ATTTCGGCGC CATCATCGAG GTCGAGGATC TCGACCAGGC CGTGCCGTTG
GCGGACGCCA TCGCCGCCGA GCATCTGGAG ATCATGACCA GGGATCCCGA TGCCTTCGCC
GCCCGGGTCC GCAATGCCGG TGCCATTTTC CTCGGCGCGC ACACGCCGGA GGCGATCGGC
GACTATGTCG GCGGCTCCAA TCACGTGCTG CCGACCGCGC GCTCGGCGCG GTTCTCCTCG
GGTCTCGGCG TGCTCGATTT CATGAAGCGC ACGTCGCTGT TGAAATGCGG TCCGGAGCAG
TTGCGCGCGC TGGGACCAGC AGCGATGACT CTGGGCAAGG CCGAGGGTCT CGACGCCCAT
TCACGCTCCG TGGGAATACG CCTCAATCTG CCATGA
 
Protein sequence
MPIRLSRAHA DFDAQFRQFL AAKRETSADV EAAARAIVDD VAKRGDAALL EATRKFDRLE 
LTAASLRVTA DEIEAAVTAC DAATLDALKF ARDRIEAFHL KQLPQDQRFT DAAGVELGWR
WSAIESAGLY VPGGTAAYPS SVLMNAIPAK VAGVSRLVMV VPAPDGKLNP LVLAAAHLGG
VSEIYRVGGA QAVAALAHGT ATIAPVVKIV GPGNAYVAAA KRLVFGKVGI DMIAGPSEVL
VIADDSGNAD WIAADLLAQA EHDASAQSIL ITDSRRLADD VARAVEGQLK TLPRAQIAGA
SWADFGAIIE VEDLDQAVPL ADAIAAEHLE IMTRDPDAFA ARVRNAGAIF LGAHTPEAIG
DYVGGSNHVL PTARSARFSS GLGVLDFMKR TSLLKCGPEQ LRALGPAAMT LGKAEGLDAH
SRSVGIRLNL P