Gene BBta_0854 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0854 
Symbol 
ID5155659 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand+ 
Start bp878814 
End bp879392 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content67% 
IMG OID640555851 
Producthypothetical protein 
Protein accessionYP_001237021 
Protein GI148252436 
COG category[S] Function unknown 
COG ID[COG4709] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.287811 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.425397 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCGCG CAGCCTTCCT GGGCCTCCTC AAGGATGGTC TCGCCGGTTT GCCTGCTGAT 
GATATCGACG AGATCGTCGC GGACTACATG TCCTATTTCG ATGAAGCCGC CGCGTCGGGG 
CGCGACGAAA TAGAGGTGGC CGCGGCGTTG GGCGACCCGC GCCGGCTGGC GCGCGAGCTG 
CGCGCCGAAA CCGGGCTGCG CCATTGGGAG ACGCACCGCA GCCTGGGCAA CTCCGCTGCC 
GTGCTGCTGG CGCTGGGCGG ACTGGCCACC GTCGACATCC TATTGCTGTT GCCGCTGCTG 
TTTGCCGTCC TGCTGGTGAC CCTGGCGCTC GGCCTCATCG TCTTCGTGCT CGGAATCGTC 
GGCCTCGGGC TGCTGCTCAG TCTCCTGAAG ATTGGGCACT TCGCCTCGAT CGCCGCGATG 
GCGCTGCGGG CGGTGGCTGG CATCGGGCTC GTCGCCGGCA GCATCGGCTG CGGCGCGCTG 
CTGCTGCTGG CGCTCAATGC CGCGGTGAGG ATGCTCGGAA ATTATGCCCG GCTGCACTAC 
CGGCTGCTCA GGCCGGAACA CGACCTGGCT CAATCATAG
 
Protein sequence
MDRAAFLGLL KDGLAGLPAD DIDEIVADYM SYFDEAAASG RDEIEVAAAL GDPRRLAREL 
RAETGLRHWE THRSLGNSAA VLLALGGLAT VDILLLLPLL FAVLLVTLAL GLIVFVLGIV 
GLGLLLSLLK IGHFASIAAM ALRAVAGIGL VAGSIGCGAL LLLALNAAVR MLGNYARLHY 
RLLRPEHDLA QS