| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_0827 |
|---|
| Symbol | |
|---|
| ID | 5150279 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 854427 |
|---|
| End bp | 855038 |
|---|
| Gene Length | 612 bp |
|---|
| Protein Length | 203 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640555825 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001236995 |
|---|
| Protein GI | 148252410 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG5342] Invasion protein B, involved in pathogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.187418 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCACCGA CCCGGATCAG GGTTTCAACG GACAGGACAG CTGACATGTC CACCCCAGCT
GCGAATGACT CGCGCCGTTT GAGCACTGTT TGGGCCCGAC TCACCACCGG CATGGTTGCC
GCTGGCGCGG CGCTGAGCTT GGCGATGAGC CTGACCCTCA CCACGTCCGG CGCGGCGCAG
GCACAGGGCG CGGTGCGCTC GGTGCATGGC GATTGGCAGA TCCGCTGCGA CACGCCGCCG
GGCGCGCAGA GCGAGCAATG CGCGCTGATT CAGAGCGTCG TCGCCGAGGA TCGCTCCAAT
GCCGGCCTCA CCGTGATCAT GCTCAAGACC GCCGACCAGA AGAGCCGGTT GATGCGCGTG
GTGGCGCCGC TCGGCGTGCT GCTGCCGTCC GGCCTCGGCC TCAAGCTCGA CAACCAGGAT
GTCGGCCGCG CCGGTTTCGT GCGCTGCCTG CCGAATGGCT GCGTCGCCGA GGTGGTGCTG
GACGACAAGC TGCTCGGCCA GCTCAAGACG GCGAAGACCG CGACCTTCAT CATCTTCGAA
ACGCCGGAGG AAGGCATCGG CTTCCCGCTG AGCCTCAACG GCCTCGCCGA CGGCTTCGAC
AAGCTGCCCT GA
|
|---|
| Protein sequence | MAPTRIRVST DRTADMSTPA ANDSRRLSTV WARLTTGMVA AGAALSLAMS LTLTTSGAAQ
AQGAVRSVHG DWQIRCDTPP GAQSEQCALI QSVVAEDRSN AGLTVIMLKT ADQKSRLMRV
VAPLGVLLPS GLGLKLDNQD VGRAGFVRCL PNGCVAEVVL DDKLLGQLKT AKTATFIIFE
TPEEGIGFPL SLNGLADGFD KLP
|
|---|
| |