Gene BBta_0796 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0796 
Symbol 
ID5154052 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp815480 
End bp816214 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content66% 
IMG OID640555794 
Producthypothetical protein 
Protein accessionYP_001236964 
Protein GI148252379 
COG category[R] General function prediction only 
COG ID[COG1234] Metal-dependent hydrolases of the beta-lactamase superfamily III 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0030667 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAGCTCC GCTTTGTCGG CTGTGGTGAC GCGTTCGGAT CGGGTGGCAG GTCCAACACC 
TGCTTCCACC TGACGGGCAT CAGCACCAAT CTGCTGATCG ATTGCGGCGC CTCGTCGCCG
CCGGCGCTGA AGCGGCTCGG CATCGCCTGC AACGATGTCT CGCTGATCCT GATCACGCAC
TTCCATGGCG ACCATTTCGC CGGGCTTCCG TTCCTGCTGC TCGACGCGCA GTTCTCGAAG
CGGACGCAGC CGCTGGTGAT CGCGGGCCCC GCCGGCATCG CGACGCGGCT GACGCAGGTG
ATGGAGGCGC TGTTCGAGCA TTCCTCGTCG ACGCCACGGA CATTCGAGCT GGCGGTGATC
GAGCTCGCGC CGGAGTGCAC GACGCGCTTC GGCGACATCG GCGTGACGCC GTTCGCGGTC
GTGCATGGCG GTTCGGGCGG GCCGTTTCTC GGCTATCGCA TCGCGGCCGA GGGACGCGTG
ATCGCCTATA CGGCCGATAC GGAATGGACC GACAGCCTGA TCCCGCTGGG CCGCGATGCC
GACCTGTTCA TCGCCGAAGC CTATACGTTC GACAGGCCGG TCAAGAACCA TCTCAGCCTG
GCTGCGCTCG CGGCGCATCT CGACGCGATC AGGCCGAAGC GGCTCGTGCT CACCCATCTG
GGCCCGGACA TGCTCTCCCG GCTGGAGACC CTGCCGCATG CGGCGGCGCA TGACGGTATG
ACGATTGATC TATAG
 
Protein sequence
MQLRFVGCGD AFGSGGRSNT CFHLTGISTN LLIDCGASSP PALKRLGIAC NDVSLILITH 
FHGDHFAGLP FLLLDAQFSK RTQPLVIAGP AGIATRLTQV MEALFEHSSS TPRTFELAVI
ELAPECTTRF GDIGVTPFAV VHGGSGGPFL GYRIAAEGRV IAYTADTEWT DSLIPLGRDA
DLFIAEAYTF DRPVKNHLSL AALAAHLDAI RPKRLVLTHL GPDMLSRLET LPHAAAHDGM
TIDL