Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_0796 |
Symbol | |
ID | 5154052 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 815480 |
End bp | 816214 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640555794 |
Product | hypothetical protein |
Protein accession | YP_001236964 |
Protein GI | 148252379 |
COG category | [R] General function prediction only |
COG ID | [COG1234] Metal-dependent hydrolases of the beta-lactamase superfamily III |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.0030667 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCAGCTCC GCTTTGTCGG CTGTGGTGAC GCGTTCGGAT CGGGTGGCAG GTCCAACACC TGCTTCCACC TGACGGGCAT CAGCACCAAT CTGCTGATCG ATTGCGGCGC CTCGTCGCCG CCGGCGCTGA AGCGGCTCGG CATCGCCTGC AACGATGTCT CGCTGATCCT GATCACGCAC TTCCATGGCG ACCATTTCGC CGGGCTTCCG TTCCTGCTGC TCGACGCGCA GTTCTCGAAG CGGACGCAGC CGCTGGTGAT CGCGGGCCCC GCCGGCATCG CGACGCGGCT GACGCAGGTG ATGGAGGCGC TGTTCGAGCA TTCCTCGTCG ACGCCACGGA CATTCGAGCT GGCGGTGATC GAGCTCGCGC CGGAGTGCAC GACGCGCTTC GGCGACATCG GCGTGACGCC GTTCGCGGTC GTGCATGGCG GTTCGGGCGG GCCGTTTCTC GGCTATCGCA TCGCGGCCGA GGGACGCGTG ATCGCCTATA CGGCCGATAC GGAATGGACC GACAGCCTGA TCCCGCTGGG CCGCGATGCC GACCTGTTCA TCGCCGAAGC CTATACGTTC GACAGGCCGG TCAAGAACCA TCTCAGCCTG GCTGCGCTCG CGGCGCATCT CGACGCGATC AGGCCGAAGC GGCTCGTGCT CACCCATCTG GGCCCGGACA TGCTCTCCCG GCTGGAGACC CTGCCGCATG CGGCGGCGCA TGACGGTATG ACGATTGATC TATAG
|
Protein sequence | MQLRFVGCGD AFGSGGRSNT CFHLTGISTN LLIDCGASSP PALKRLGIAC NDVSLILITH FHGDHFAGLP FLLLDAQFSK RTQPLVIAGP AGIATRLTQV MEALFEHSSS TPRTFELAVI ELAPECTTRF GDIGVTPFAV VHGGSGGPFL GYRIAAEGRV IAYTADTEWT DSLIPLGRDA DLFIAEAYTF DRPVKNHLSL AALAAHLDAI RPKRLVLTHL GPDMLSRLET LPHAAAHDGM TIDL
|
| |