Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_0723 |
Symbol | |
ID | 5152700 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 743794 |
End bp | 744525 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640555723 |
Product | GntR family transcriptional regulator |
Protein accession | YP_001236895 |
Protein GI | 148252310 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.214964 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCTGG ACGATCTTCC GCCGCGGACG CAGCAGCGGC CCGCCCGCGA TCCTGATGGG CCGCGCGCCG ATCGCGCGCC GCCAGCGGTC GCAAAGATCA CTCGCGCGGA GGAGCTGCGC CTGCAGCTCG CCGACGATAT CGTGCGCGGT GCGCTGGCGC CCGGTGCGCC GCTCGACGAA ACCGAGATCG CCAAGCGCTT CAACGTCTCG CGCACCCCGG TGCGCGAAGC GCTGCGCCAG CTCGCGGCAT CCGGCCTGAT CGAGGCGCGC GCGCATCGCG GCGCAGTGGT GGCGCGGCCC TCCGTCGATC GGCTGACTGG GATGTTCGAG GCGATGGCCG AGCTCGAAGG CCTGTGCGCC GGCCTCGCAG CGCAACGTAT GACGCCGGTC GAGCGGCAGC GGCTCGAAGC CATTCACGAG GAATTGCGCA ATCTCAGCCA TGCCGGCAAT CCCGAGCGCT TCCACGAGGT GAACGAGCGC TTCCACAACG CGATCTATGC CGGCGCGCAC AATGCCTATA TCGCCGAGAT CACCTTGGCG ACGCGGGTGC GCGTGCAGCC GTTCCGCCGG GCCCAGTTCC GCAATCTCGG CCGCCTCGCC AAGTCGCATG CCGAACACGA TCGCGTCGTC GTGGCCATCC TGCGTGGCGA CAAGGCTGGC GCGGCCAGCG CCATGAAAGC CCATATCGAG CTGGTGCGCG GCGAGTACGA GATTTACGCG GTGTCGGTGT AG
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Protein sequence | MSLDDLPPRT QQRPARDPDG PRADRAPPAV AKITRAEELR LQLADDIVRG ALAPGAPLDE TEIAKRFNVS RTPVREALRQ LAASGLIEAR AHRGAVVARP SVDRLTGMFE AMAELEGLCA GLAAQRMTPV ERQRLEAIHE ELRNLSHAGN PERFHEVNER FHNAIYAGAH NAYIAEITLA TRVRVQPFRR AQFRNLGRLA KSHAEHDRVV VAILRGDKAG AASAMKAHIE LVRGEYEIYA VSV
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