Gene BBta_0723 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0723 
Symbol 
ID5152700 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp743794 
End bp744525 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content69% 
IMG OID640555723 
ProductGntR family transcriptional regulator 
Protein accessionYP_001236895 
Protein GI148252310 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.214964 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTGG ACGATCTTCC GCCGCGGACG CAGCAGCGGC CCGCCCGCGA TCCTGATGGG 
CCGCGCGCCG ATCGCGCGCC GCCAGCGGTC GCAAAGATCA CTCGCGCGGA GGAGCTGCGC
CTGCAGCTCG CCGACGATAT CGTGCGCGGT GCGCTGGCGC CCGGTGCGCC GCTCGACGAA
ACCGAGATCG CCAAGCGCTT CAACGTCTCG CGCACCCCGG TGCGCGAAGC GCTGCGCCAG
CTCGCGGCAT CCGGCCTGAT CGAGGCGCGC GCGCATCGCG GCGCAGTGGT GGCGCGGCCC
TCCGTCGATC GGCTGACTGG GATGTTCGAG GCGATGGCCG AGCTCGAAGG CCTGTGCGCC
GGCCTCGCAG CGCAACGTAT GACGCCGGTC GAGCGGCAGC GGCTCGAAGC CATTCACGAG
GAATTGCGCA ATCTCAGCCA TGCCGGCAAT CCCGAGCGCT TCCACGAGGT GAACGAGCGC
TTCCACAACG CGATCTATGC CGGCGCGCAC AATGCCTATA TCGCCGAGAT CACCTTGGCG
ACGCGGGTGC GCGTGCAGCC GTTCCGCCGG GCCCAGTTCC GCAATCTCGG CCGCCTCGCC
AAGTCGCATG CCGAACACGA TCGCGTCGTC GTGGCCATCC TGCGTGGCGA CAAGGCTGGC
GCGGCCAGCG CCATGAAAGC CCATATCGAG CTGGTGCGCG GCGAGTACGA GATTTACGCG
GTGTCGGTGT AG
 
Protein sequence
MSLDDLPPRT QQRPARDPDG PRADRAPPAV AKITRAEELR LQLADDIVRG ALAPGAPLDE 
TEIAKRFNVS RTPVREALRQ LAASGLIEAR AHRGAVVARP SVDRLTGMFE AMAELEGLCA
GLAAQRMTPV ERQRLEAIHE ELRNLSHAGN PERFHEVNER FHNAIYAGAH NAYIAEITLA
TRVRVQPFRR AQFRNLGRLA KSHAEHDRVV VAILRGDKAG AASAMKAHIE LVRGEYEIYA
VSV