Gene BBta_0689 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0689 
Symbol 
ID5151967 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp706880 
End bp708103 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content67% 
IMG OID640555691 
Productmajor facilitator superfamily permease 
Protein accessionYP_001236863 
Protein GI148252278 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGACG TTCTCGCCGC ATCGCAACAT ACCGGTGCTC CGGTCCGGGC CGCCTCCTCG 
CTGCGCACGC TGGCGCTGAT CTCGCTCGCG CACTGGGTCA GCCACCTGCA CATGCTGGTG
CTGCCGATGC TGTTTCCCTA CCTAAAGGAG AGGCTCGGCG TCGGCTATGT CGAGCTCGGC
TTTCCGCTCA CGGTGTTCGC CGTCGTCTCC GCGCTGACCC AGGCCCCGGT CGGCTATCTC
GTCGACCGCG CAGGCGCGCG CCGGATCCTG CTGCTCGGCC TGACGCTCGG CGGCCTGTCG
CTCGCGTTGC TGGGGATCTA CCTGACCTAT GCCAGCCTCG TCGCCTCGGC CGTGCTGCTG
GGCCTCGCCA ATGCCGTCTA TCATCCCTCC GACTACGCGC TGCTGTCGGC GCACATGGAG
GAGAGCCGGA TGGGCCGCGC CTTCGGCGTG CACACCTTCG CCGGCTATCT CGGCGGCGCC
GTCGCGCCCG CGATCATGGC GGCCCTGGTC ACCACGGTCG GCGGCTCCGG CGCGCTGATC
GCGGCCGGCC TGGTCGGTCC GCTGGCAGCG CTGCTGCTGC TCGCCGGCAA TGTGCCGGAG
GTGCCGCCGC ATCCGCATCA CACCAAGGCC GACGGCACCC GGGCCAAACA GCCCAGCCTG
CTGACGCCGA TGCTGATGCT GCTGACCGTG TTCTTCATGC TGCTCAGCCT GTCCAACGCC
GGCATTTCCA GCTTCGGCGT CGTGGCCTTC ATGAACGGCT ACGGCATCTC GTTCTCGACC
GCCAACATCG CGTTGACCGC GTTCCTCGGC GCCAGCGCCA TCGGCGTGCT CGCCGGCGGC
CAGCTCGCCG ATCGCATCCG TCATCACAAC CTTGTCGCGG CCGTCGCCTA TGCGATCAAT
GCGGTGCTGG TGCTGATCAT CACCTTCGTG AGCCTGCCCG CTGCATTGCT GATCGCGATC
ATGCTGGTCG CAGGCTTCAT GAGCGGCGTC ATCGCACCAT CCCGCGACAT GCTGGTGCGC
AATGCGGCGC CTGCAGGCGC GGCCGGCCGC GCCTTCGGCA TCGTCTCCAC CGGCTTCAAT
TTCGCCGGCG TCGTCAGCCC GTTGCTGTTC GGCTGGATCA TGGACATGAA CGCGCCGCGC
TGGGTGTTCG GCACCTCGGT CGTGTTCATG CTGCTGACCA TCGTGCTCGC GTTCTTCACC
GAGCCAAAGA AGGCGAAGGC TTAA
 
Protein sequence
MADVLAASQH TGAPVRAASS LRTLALISLA HWVSHLHMLV LPMLFPYLKE RLGVGYVELG 
FPLTVFAVVS ALTQAPVGYL VDRAGARRIL LLGLTLGGLS LALLGIYLTY ASLVASAVLL
GLANAVYHPS DYALLSAHME ESRMGRAFGV HTFAGYLGGA VAPAIMAALV TTVGGSGALI
AAGLVGPLAA LLLLAGNVPE VPPHPHHTKA DGTRAKQPSL LTPMLMLLTV FFMLLSLSNA
GISSFGVVAF MNGYGISFST ANIALTAFLG ASAIGVLAGG QLADRIRHHN LVAAVAYAIN
AVLVLIITFV SLPAALLIAI MLVAGFMSGV IAPSRDMLVR NAAPAGAAGR AFGIVSTGFN
FAGVVSPLLF GWIMDMNAPR WVFGTSVVFM LLTIVLAFFT EPKKAKA