| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_0642 |
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| Symbol | |
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| ID | 5151078 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 646409 |
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| End bp | 647602 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640555644 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001236816 |
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| Protein GI | 148252231 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.272369 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGATCTCAG ACCGAAACAT CCTGACCGCG CTCGCGGTTC TGGCCATCAC GCAAGTGATC
GGCTGGGGCA CCCTCAGTTT GCCGGCCGTG CTCGGTCGCG ACATGGCCGT GGATCTCGGG
CTGAGCCTGA GCGCGGTGTT TGCGGGCAAT TCGGTGCTGT ACGTGGCGAT CGGCCTGTGC
TCGCCCTTGC TGGCCCGGTC GTTCGCGCGT CACGGCGGCC GACGGGTCAT GATGGTCGGT
ACGCTCGTCG CCGCGGCGGG GTTCACGATG CTGTCCGCTG CGCGAGGGCC GATCTCGTAT
TACATCGCCT GGCTTGGGCT CGGCGTGGCC GGCAGCGCGA CGCTGTCGAC CGCTGCCTAT
GTCGTCCTCA ACGAGGTCGC CGGCCCTGGT GCGCGGCGCG CCATCGGAGC CCTGATGCTC
GTGACCGGCT TGTCGAGCAG CATCTTCTGG CCGGTCAGCG CGGTGATCGC CGCCCAGCTT
GGCTGGCGCG GCACGTGTCT TGTCTATGCC GCCCTGCTGC TGCTGGTTTC GCTGCCGCTT
CTTGCGGCGC TGCTGCCAAA GCGTCGCAAC GAGCAACCGA CGCTTGCATC GGATGCCGGT
TCTGCGATGG CCCGGCCGGA GCCCAGCCAA GGCACATTCT ATCTTTTGAC CGCTGCCATC
GCCCTCAATG CGTTCGTCAC GATGGGACTG AGCGCGGTCT TGATCGAGCT GTTGAAGGTG
GAGGGACTGA CGGCGCTGGA GGCGATCGGC TTCGGTTCGA TGCTGGGGGT GATCCAGATC
AGCGCCCGTG CCCTCGATCT GCTGGGAGGA GGGCGCTGGG ACGCGATTAC AACCGCGCTT
GCCGCAGGCC TTGCTCTGCC GCTGGCGATG CTGCTGCTGA TGGTGTGGGG CGGCTCTGCC
GGCGCTGTGG CGGTGTTCAT TGTCGTGTAT GGGCTCGGCA GCGGTGCGCT GGCGGTGGCA
CGTGCGACCA TGCCGCTTGT ATTCTACGAT GGAGCGGCGT TTGCCAAAGC GTCGGCGCAG
ATTGCGCTCC CGCTCAACCT GCTCTCCGCC ACGGCAGCGC CGGTCATGGC CGCCCTGCTG
ACCAGCTTCG GCAGCAACAC TTTGTTAAGC CTGACCCTGA TCTGCTCGTC GGCGGCCCTG
CTCATGCTGC TGCTGCTCCG GCTGCTGCGC CCGGCCGTTG CGGCGTCGGC ATGA
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| Protein sequence | MISDRNILTA LAVLAITQVI GWGTLSLPAV LGRDMAVDLG LSLSAVFAGN SVLYVAIGLC
SPLLARSFAR HGGRRVMMVG TLVAAAGFTM LSAARGPISY YIAWLGLGVA GSATLSTAAY
VVLNEVAGPG ARRAIGALML VTGLSSSIFW PVSAVIAAQL GWRGTCLVYA ALLLLVSLPL
LAALLPKRRN EQPTLASDAG SAMARPEPSQ GTFYLLTAAI ALNAFVTMGL SAVLIELLKV
EGLTALEAIG FGSMLGVIQI SARALDLLGG GRWDAITTAL AAGLALPLAM LLLMVWGGSA
GAVAVFIVVY GLGSGALAVA RATMPLVFYD GAAFAKASAQ IALPLNLLSA TAAPVMAALL
TSFGSNTLLS LTLICSSAAL LMLLLLRLLR PAVAASA
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