Gene BBta_0625 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0625 
Symbol 
ID5149229 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp627912 
End bp628412 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content63% 
IMG OID640555629 
Producthypothetical protein 
Protein accessionYP_001236801 
Protein GI148252216 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3435] Gentisate 1,2-dioxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCTCA GGGTGGGAGA TTACGTCCGC TATGCGGATT ATCGCGCGCA TTTCGACGCC 
GACGTCGCTC GGCCTCCCGT GCTGTGGCGA AGAAAGGATC TGCTCAAGGT TCTGGATGCA
GCTGATAAGG ACGAGCGCGG GACCGTTGCT CTCTCGAGCA CGGGAACGAT CGATGGGCTC
ACGATCATGG ACGGACTCTC GATGACCGTT CAGGTCGTGC CGGCGGGATC GTCGACGCGG
CTGCACTCTC ATTCATGGTG GCATCTCTTC ATCATCCAGT CCGGCCATGG TGTGGTCTGG
TTTGGCGACG GCGGCGATGA GGCGCCGGTC CAGGCGGGCG ACCTTCTGCT CGTGCCGGCC
TGGAGCGATC ACGCGTTTCG GTGTTCATCC GAGGATGCCC TGGTAATGGC CGTGCTGGGT
AATCTGCCGC AACAGGCGCG GCTATCGAAC AAGCTCGCTC GCGAGCCGGG GGATCCAATG
GCGGTCGGGA AACGCGCATG A
 
Protein sequence
MSLRVGDYVR YADYRAHFDA DVARPPVLWR RKDLLKVLDA ADKDERGTVA LSSTGTIDGL 
TIMDGLSMTV QVVPAGSSTR LHSHSWWHLF IIQSGHGVVW FGDGGDEAPV QAGDLLLVPA
WSDHAFRCSS EDALVMAVLG NLPQQARLSN KLAREPGDPM AVGKRA