Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_0623 |
Symbol | |
ID | 5149228 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 626690 |
End bp | 627325 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640555628 |
Product | GntR family transcriptional regulator |
Protein accession | YP_001236800 |
Protein GI | 148252215 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGTCTCG ACTATGCATT CTGGCCGCGG CAGCAGCTGC ATATCGAGGA TCTCGCCGCT CTTCTGTCGT CGAGTGCGAC GCCGGTCCGG GAAGCTCTCG CCCGCCTGGC TGGGGAGGGC CTGATCGAGG CGCTGCCCAA CCGCGGCTAC GTGGCGAAGG CGCTCTGCGA AGATCAGATG CGCGGCAATC TCGATCTTCT CTTCACGCTG CTGACGGACG CAATTGCACG GGCGAAGCCG GAGCGCTGGC CCATCCGGGC CGAGCAGGGC GGTTTGGACG AGCAGGATCT GTTCCGGTTG GCCGATGCGA ACTTCATGAA TATCGCGCGC CTGCCGGACA ACGACGTGTT GTGTGAGCAC ATTGTCCGGC TGATGGAGCA GACGCGCTTC GTCAGGAGGC TGTATTTCGA GGACGACAGC GGCCGTGCGG AGATGACGGA GCCGATCAGA TGGCTTCGTG ACAGCCTGGT CACGCACGAT GCGATGTCCG CGAAGCAGGC GCTGGACGAT CAGATCCGTG ATCTTCACGA ACGCCTCGGT GCGCTGATCA AAGAGGGGCG CACGCGCTCG ATGACTGTCA ACCGTGCGCC CATGCTCGTT CGAAGCGTCG GAGCGATACG ACTCCCCACG GCTTGA
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Protein sequence | MCLDYAFWPR QQLHIEDLAA LLSSSATPVR EALARLAGEG LIEALPNRGY VAKALCEDQM RGNLDLLFTL LTDAIARAKP ERWPIRAEQG GLDEQDLFRL ADANFMNIAR LPDNDVLCEH IVRLMEQTRF VRRLYFEDDS GRAEMTEPIR WLRDSLVTHD AMSAKQALDD QIRDLHERLG ALIKEGRTRS MTVNRAPMLV RSVGAIRLPT A
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