Gene BBta_0623 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0623 
Symbol 
ID5149228 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp626690 
End bp627325 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content63% 
IMG OID640555628 
ProductGntR family transcriptional regulator 
Protein accessionYP_001236800 
Protein GI148252215 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGTCTCG ACTATGCATT CTGGCCGCGG CAGCAGCTGC ATATCGAGGA TCTCGCCGCT 
CTTCTGTCGT CGAGTGCGAC GCCGGTCCGG GAAGCTCTCG CCCGCCTGGC TGGGGAGGGC
CTGATCGAGG CGCTGCCCAA CCGCGGCTAC GTGGCGAAGG CGCTCTGCGA AGATCAGATG
CGCGGCAATC TCGATCTTCT CTTCACGCTG CTGACGGACG CAATTGCACG GGCGAAGCCG
GAGCGCTGGC CCATCCGGGC CGAGCAGGGC GGTTTGGACG AGCAGGATCT GTTCCGGTTG
GCCGATGCGA ACTTCATGAA TATCGCGCGC CTGCCGGACA ACGACGTGTT GTGTGAGCAC
ATTGTCCGGC TGATGGAGCA GACGCGCTTC GTCAGGAGGC TGTATTTCGA GGACGACAGC
GGCCGTGCGG AGATGACGGA GCCGATCAGA TGGCTTCGTG ACAGCCTGGT CACGCACGAT
GCGATGTCCG CGAAGCAGGC GCTGGACGAT CAGATCCGTG ATCTTCACGA ACGCCTCGGT
GCGCTGATCA AAGAGGGGCG CACGCGCTCG ATGACTGTCA ACCGTGCGCC CATGCTCGTT
CGAAGCGTCG GAGCGATACG ACTCCCCACG GCTTGA
 
Protein sequence
MCLDYAFWPR QQLHIEDLAA LLSSSATPVR EALARLAGEG LIEALPNRGY VAKALCEDQM 
RGNLDLLFTL LTDAIARAKP ERWPIRAEQG GLDEQDLFRL ADANFMNIAR LPDNDVLCEH
IVRLMEQTRF VRRLYFEDDS GRAEMTEPIR WLRDSLVTHD AMSAKQALDD QIRDLHERLG
ALIKEGRTRS MTVNRAPMLV RSVGAIRLPT A