| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_0556 |
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| Symbol | |
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| ID | 5156006 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 554659 |
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| End bp | 555585 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640555567 |
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| Product | HlyD family secretion protein |
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| Protein accession | YP_001236740 |
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| Protein GI | 148252155 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.230089 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCTGC CAAAATCCCT CAAAACCGTA GCCGGCGCGA TCATCTTCGT GGCTTTGTTC
GCCGGCTATT ACACCTACGA GCATCGCTCG CATCCGGCCG CCGAGGAGCC GCCGATGCAG
GCGCAGGTGC TGGTGACGAA GGCGGTGAAG GCCTGCTTCT CCGATCTCGT CCGGGTCACC
GGGTTTGTCG TTCCCCGCCG CGAAGCCGTC GTCGGCGCCG ACCAGGAGGG ATCGCGGGTG
ACGGATGTCC TCGTCAAGGA AGGCGACACC GTCACGGAGA ATCAGGAGCT GGCCCGCCTG
ACGCCGCCCC CGCCGCAGCC GGGGGCGCCG GCTGCTGCCG CAAACCGGCC GGTGTCGCTG
CGTGCGCCGG CGGCTGGCGT CGTCACCGAG GTCCGTACCA TCGCCGGCGC GCCCGCCTCC
CCCCAGGCCG GACCGATGTT CCGCATTGCC GTGAACAATG AGCTGGAACT CGACGCCGAA
GTCCCGAGCG TTCACCTCCT GAAGCTCAGC CCGGGCCTGC CCGCGCGCAT CACGCGCGAT
AATCTGCCCG ACATCATCGG CCGCCTCCGC GTGGTGGCGC CGCAGGTCGA TCGCTCGACC
CAGCTGGGCC ACGCCCGCAT CACGCTGACC AGCAGCGCAA CGCTGAAGCC GGGGATGTTC
GCCCGCGCCA ATATCGACGC CAGGCGGAGC TGCGGCGTCG CCGTTCCCAA TACGGCGATC
GATCATCTCA CCATCCAGGT CGTGAAGGGC AACACGATCG AGACCCGCAG GGTGCGGGTC
GGCCTGGTGT CCGACACATC GACCGAGATC CTGGAAGGTC TCGCGGAGGG TGAGATCGTG
GTCGCCGACG CCGGCAGCTC GCTGCATGAT GGTGACCAGA TCAAGACCAT GTTCGCCGAA
GACATCGATC GCACGCGGGT ACGCTGA
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| Protein sequence | MKLPKSLKTV AGAIIFVALF AGYYTYEHRS HPAAEEPPMQ AQVLVTKAVK ACFSDLVRVT
GFVVPRREAV VGADQEGSRV TDVLVKEGDT VTENQELARL TPPPPQPGAP AAAANRPVSL
RAPAAGVVTE VRTIAGAPAS PQAGPMFRIA VNNELELDAE VPSVHLLKLS PGLPARITRD
NLPDIIGRLR VVAPQVDRST QLGHARITLT SSATLKPGMF ARANIDARRS CGVAVPNTAI
DHLTIQVVKG NTIETRRVRV GLVSDTSTEI LEGLAEGEIV VADAGSSLHD GDQIKTMFAE
DIDRTRVR
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