| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_0554 |
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| Symbol | |
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| ID | 5156125 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 552110 |
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| End bp | 553666 |
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| Gene Length | 1557 bp |
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| Protein Length | 518 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640555565 |
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| Product | caspase-like domain- and TPR repeat-containing peptidase |
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| Protein accession | YP_001236738 |
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| Protein GI | 148252153 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4249] Uncharacterized protein containing caspase domain
[COG4785] Lipoprotein NlpI, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.463703 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCTGGACC GCTGGACCGC CATCGTGATG ACTGCTCGCC TGCTGTTGCT GCTCGGTTTG
ATGTTTGCCG TGGCGTTCTC TGGTCCCGCG CTGGCGGCCG GCGATCGCAT CGCGCTGGTG
ATCGGCAATG CGAAATACCC GGATGCCGAA GCGCCGTTGA AAGAGCCGAT CAACGATGCG
CGCGACCTCA CCGACGAGTT GAAGCGCGAC GGCTTTACGG TCGAAACGCT GGAGAACGCC
ACCGGCGAAG CGATGCGCCG CGGGCTCGAA CGGCTCTATG GCAGCATCAA GCCCGGCTCG
GTGGCGCTGG TGTTCTTCTC CGGCTTCGGC ATCCAGTCGA ATCGCACCAG CTACATGATT
CCGGTTGATG CGCAGATCTG GCAGGAGGCC GATGTCCGAC GCGACGGCAT CAGCCTTGAG
CAGGTGCTGC AGGAGATCAA CAGCCGCGGC GCCGGGGTCA AGATCGCGCT GCTCGATGCG
TCCCGCCGCA ATCCCTATGA GCGCCGCTTC CGCACCGCCT CGTCCGGACT GGCGCCGGTC
ATTGCGCCAA GTGGTACCCT GGTCATGTAC TCGGCGGCGC TGTCGGCGGT CGTGTCCGAT
ACGGGCCGCG ACCGCAGCCT GTTCGTGCAG GAGCTCTTGA AGGAAATCCG CGTTCCCGAT
CTGACCGCGG AGGAGACGCT GAACCGCACC CGGGTCGGCG TGACCCGCGC CTCGCGCAGC
GAGCAGGTGC CGTGGATCTC ATCCTCGCTC GCCGAAGACT TCTCCTTCGT GCCGGGCGCA
GGCGGCGTGC GGCCCACTCC GCCGGTCGAG AGCAGCACGG CGCCAGTCGC GGCTCCGACG
CCGACCCCCA CGCCGACCCA GGTCGTGGTG GCGCCGCCGC TCCCGCCGCC ACCTCCACCT
CCGCCCCCGC CGGTCCAGAA GGCGGATGCG CCGCCGGCGC CGCCCGTTGT TCCGCCGCCG
CCGGTTCCGA CCCCGTCGCC CGTCATCGCG ACCACCGCGC CGACGACCAC CGCGCCGGCC
ACCAACGTAA CGGCCGCGCC GCCGGTGCAG GATCCCTTCG CCGAGGACCC GACCATCAAG
AGCCTGACGG CCAAGATCGC TGCCAATCCG GAAGACGCCG GCGCGCTCTA CCGGCGCGGC
CAGGTCTATG CCAGCAAGGG CGCCTATGCG CAGGCCATCC GCGATTTCGA CGACACGATC
CGGCTCAATC CGAAGGATGT CGAGGCCCTC AATAATCGCT GCTGGGCGCG CACCGTGGTC
GGTGAGCTGC AGGCGGCGTT GCGCGACTGC AACGAGGCGC TCCGGCTGCG GCCGAATTTC
GTCGATGCGC TCGACAGCCG CGGGCTCGTC AACCTCAAGA GCGGCGCGAC CAAGAACGCG
ATCGCCGATT TCGACGCGGC GCTGAAGATC AACCCGCGGC TGACGTCATC ATTGTATGGG
CGAGGCCTAG CCAAGCAGCG CAACGGCGCG GCGCAGGAGG GCGCGCTCGA CATCGCCAAC
GCCAAGGCGA TCGATCCCAA TATCGTCCGC GAGTTCGAAA GCTACGGCGT GCGCTGA
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| Protein sequence | MLDRWTAIVM TARLLLLLGL MFAVAFSGPA LAAGDRIALV IGNAKYPDAE APLKEPINDA
RDLTDELKRD GFTVETLENA TGEAMRRGLE RLYGSIKPGS VALVFFSGFG IQSNRTSYMI
PVDAQIWQEA DVRRDGISLE QVLQEINSRG AGVKIALLDA SRRNPYERRF RTASSGLAPV
IAPSGTLVMY SAALSAVVSD TGRDRSLFVQ ELLKEIRVPD LTAEETLNRT RVGVTRASRS
EQVPWISSSL AEDFSFVPGA GGVRPTPPVE SSTAPVAAPT PTPTPTQVVV APPLPPPPPP
PPPPVQKADA PPAPPVVPPP PVPTPSPVIA TTAPTTTAPA TNVTAAPPVQ DPFAEDPTIK
SLTAKIAANP EDAGALYRRG QVYASKGAYA QAIRDFDDTI RLNPKDVEAL NNRCWARTVV
GELQAALRDC NEALRLRPNF VDALDSRGLV NLKSGATKNA IADFDAALKI NPRLTSSLYG
RGLAKQRNGA AQEGALDIAN AKAIDPNIVR EFESYGVR
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