| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_0548 |
|---|
| Symbol | |
|---|
| ID | 5156113 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 547609 |
|---|
| End bp | 548472 |
|---|
| Gene Length | 864 bp |
|---|
| Protein Length | 287 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640555561 |
|---|
| Product | putative peptidase |
|---|
| Protein accession | YP_001236734 |
|---|
| Protein GI | 148252149 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4249] Uncharacterized protein containing caspase domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATGACCG CAAGGCAGCC TTCCTTCTCC CGCCGTTCGG CCGTGATCGC CGCCGCGTTG
CTCTGCACGG TGTCGCTCGC GATCGGCGCG AATGCTGCCT TGAACAAGCG CTCGCTCGAA
GCCCCGAAAT CTGCCGCCGC CGAGCAGGGC GTTGCATCGA CCGGCAACGG CGCGCGGCTC
GCGCTCGTCA TCGGCAATGG TCACTACCCC GACGCCAACG CGCCGCTGGC CCAGCCGATC
AATGATGCCC GTGCGCTGAC CGGCGCGCTG CGCCGCGGCG GCTTCGACGT CGACGTGGTC
GAGGACGCGA GCAAGGACGA TCTGGCCCGC GCGGTCGAGC GCCTGACCGC GAGAATCAAA
CCGGATTCGG TAGTGATGCT GTTCTTCGGG GGCTACGCGA TCCAGGCGGG CCGCGACAGC
TACATGATCC CGACCGATGC CAAGATCTGG AAGGAAGCGG ACGTCCGTCG CGAGGGCACC
AGCATCGAGA GGGTGCTCGA CGCCGTCAGC GAGAAGGGCG CCCGGGCCAA GCTCGTCGTG
ATCGACGCCT CGCGCCGCAA TCCCTTTGAG CGCCGCTTCC GCGCTTATTC GCATGGCCTC
GCGCCGATCA ACGCGCCCGC CAACGCGCTG ATCATGTCGT CGGCGACGCC CGGCAAGGTG
CTCGACGACC CGCAGCAGGC CAACAGCGTG CTCGTCTCGG AGCTGCTCAA TCAGCTCGGC
AAGAGCCCGA GCGCCGAGAC GGTGTTCAAC AAGACCCGCA ATGCGATCGC GCGCAGCTCC
GACGGCGAGC AGGTGCCGAC CGTGTCATCG TCGCTGGTCG AGGACATCCG CCTCAGCGCC
GATGTCGCCA ACGCCGGCAG CTGA
|
|---|
| Protein sequence | MMTARQPSFS RRSAVIAAAL LCTVSLAIGA NAALNKRSLE APKSAAAEQG VASTGNGARL
ALVIGNGHYP DANAPLAQPI NDARALTGAL RRGGFDVDVV EDASKDDLAR AVERLTARIK
PDSVVMLFFG GYAIQAGRDS YMIPTDAKIW KEADVRREGT SIERVLDAVS EKGARAKLVV
IDASRRNPFE RRFRAYSHGL APINAPANAL IMSSATPGKV LDDPQQANSV LVSELLNQLG
KSPSAETVFN KTRNAIARSS DGEQVPTVSS SLVEDIRLSA DVANAGS
|
|---|
| |