Gene BBta_0486 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0486 
Symbol 
ID5152389 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp478932 
End bp479825 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content65% 
IMG OID640555504 
Productputative myo-inositol catabolism protein 
Protein accessionYP_001236677 
Protein GI148252092 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1082] Sugar phosphate isomerases/epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.425956 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.198393 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCTGT ACGGCACCAA TCCCATCGCC TGGTCGAACG ACGACGACTG GAGCATCGGC 
GATCATCTGT CGCTCGACGA CTGCCTGCGC GACTGCCGCG AGATCGGCTT CGACGGCATC
GAGAAGGGCC ACAAGATGCC GGACGAGGGC TCGGCGTTGA AGGCGAAACT CGGCGAATAT
GGCCTGCGCT TCGCCGCCGG CTGGCACTCG ACCAACCTCC TCGTCAACGA CATCGAGACC
GAGATGAAGG CGTTGCAGAG CTTCATCGAC ATGGTGAAGG CGGCCGGCGG CGACCACATC
AATGCCTGCG AATGCTCGAA CACCGTCCAT GGCAACGACG ATGTTGCGGT CAACGACCGT
CCGATCATGA CCGACGCGGA GTGGGACCGC TTCTCCCGCG GCTACGAGGC GCTGTCGCAC
TACGCGCATG AGCAGGGCGT GAAGATGGGC TACCACCATC ACATGGGCAC GATCATCGAG
ACCCCCGAGG ACATCGACCG CTTCATGGCG CAAGCGGGGC CCTACACGCG GCTGCTGTTC
GACACCGGTC ATGCGCGCTT CGGCGGCGGC GATCCGGTCG CGATCCTGGC GAAATACGTC
GATCGCGTCA GCCATATCCA CTGCAAGAAT GTCCGGCCGC CGGTCATGCG TGACGTGCGC
GACAACGGCC TGAGCTTCCT CGAAGGGGTG CGGCGCGGCG CCTTCACGGT GCCGGGCGAT
CCCGACGGCT GCATCGATTT CGCGCCGGTG CTGAAGATCG CAGCCGACAG CGGCTATTCC
GGCTGGATCG TCATCGAAGC CGAGCAGGAC AGCCTCAGAT ACGAACCGCT CAGCTATCAG
GGCCTCGGCT ATCGCACGCT GAGGGAGCTC GCCGCACGCG TCGGCCTGCG CTGA
 
Protein sequence
MILYGTNPIA WSNDDDWSIG DHLSLDDCLR DCREIGFDGI EKGHKMPDEG SALKAKLGEY 
GLRFAAGWHS TNLLVNDIET EMKALQSFID MVKAAGGDHI NACECSNTVH GNDDVAVNDR
PIMTDAEWDR FSRGYEALSH YAHEQGVKMG YHHHMGTIIE TPEDIDRFMA QAGPYTRLLF
DTGHARFGGG DPVAILAKYV DRVSHIHCKN VRPPVMRDVR DNGLSFLEGV RRGAFTVPGD
PDGCIDFAPV LKIAADSGYS GWIVIEAEQD SLRYEPLSYQ GLGYRTLREL AARVGLR