| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_0461 |
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| Symbol | hupL |
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| ID | 5154212 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 460952 |
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| End bp | 462550 |
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| Gene Length | 1599 bp |
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| Protein Length | 532 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640555479 |
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| Product | uptake hydrogenase large subunit |
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| Protein accession | YP_001236652 |
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| Protein GI | 148252067 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0374] Ni,Fe-hydrogenase I large subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0412944 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0758473 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGCAG CAGTTCAAAC GCTTGATATT TCACCCGTCG GACGCGTCGA GGGCGACCTC
GACGTGCGCG TCGATATCCA GAACGGCGTC GTCGTTAATG CGTGGACCCA GGCCGAACTC
TTCCGCGGCT TCGAGGTGAT CCTTCGCGAC AAGGATCCTC AAGCGGGACT CGTAGTGACG
CCACGCGCGT GTGGCATCTG CGGCGCCTCG CATCTGACTT GCGCCGCCTG GGCGCTCGAC
ACCGCGTGGA AGACCGAGGT TCCCCGCAAC GCCATCCTCG CGCGCAATCT CGGACAGATC
GCAGAGAGCC TGCAGAGCCT TCCCAGGCAC CATTACGGCC TCTTCATGAT CGACTACACG
CACAAGAACT ACTCGCGCTC CAAATATTAC GAGGAGGCGG TTCGGCGATG GTCACCATAC
ACGGGTACCA ACTACGAGCT CGGCGTTACG ATTTCGGGCC GTCCCGTCGA AATTTATGCG
CTTCTCGGTG GCCAGTGGCC GCATTCGAGT TTCATGGTCC CTGGCGGGGT GATGTGCGCG
CCCACGCTGA CTGACGTCAC CCGCGCCTGG TCGATTCTGG AGCATTTCCG GCGCAACTGG
ATGGAGCCGG TATGGCTTGG CTGCTCCTTC GAGCGCTACG AGGAAATCAA ATCCTACGAC
GACTTCATGG CGTGGCTAGA CGAGCGGCCC GAGCATGCCA ACTCAGACCT CGGGATGTTC
TGGCGCATGA GCCAGGACAT CGGCGTCGAC AAATACGGCA AGGGCCACGG AAAATACGTG
TCCTGGGGAT ATCTGCCTCA TGAGGACAAG TACAACCGCC CGACGATCGA GGGCCGCAAT
GCGGCGGTGA TCATGAAGAG CGGTGTTTAT GATGGCGCCA GTGACACCCA TAAGCTGATG
GATCAGATTC ACACCCGCGA GGATCTGATG CATGCCTGGT ACGATGAACA GAGCGGCAAA
CACCCCTTCG ACCGAGTCAC CAAGCCGGTT GGCAAAAACC CCGTCGATCA CACTAAGCAA
TATTCATGGG CGACGGCCGT TCGCCACGAC CAGAACGGCA GGCTCGAAGC CGGTCCGCTG
GCGCGCCAGC TCATTGCTGG CGGACCGCAC GGAGAACGCT GGCAGCATCA CGATCCGCTG
GTGCTCGACA TGTATAGGAA ACTCGGAGGC GCAAGCGTCA TGCTGCGTCA TTTCGCCCGC
ATGCATGAAG GCGTGAAGCT CTATCGGCAA GCCGAGCATG CCCTGCGCGA ATTCCGGCTG
AACGATCCCT GGTATGTCAA ACCGACGGAA AAGGATGGGC GGGGCTGGGG CGCCACCGAG
GCGATCCGCG GCGCCCTTTG TCACTGGATC GAGGTGCAGG GCGGGAAGAT CAAGAACTAC
CAGATCATTA CGCCAACGAC CTGGAACGTC GGTCCGCGTT CCGACCGTGA TGAACTTGGC
CCGATCGAGC AAGCGCTCAT CGGAACTCCG GTTGCCGACG TGAATGATCC TGTAGAGGTC
GGGCATGTTT GTCGCTCATA TGACTCGTGC CTCGTCTGTA CTGTGCACGC CCATCACGCC
AGCACGGGCA AGGAACTTGC ACGTTTCCGC ACGGCCTAG
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| Protein sequence | MSAAVQTLDI SPVGRVEGDL DVRVDIQNGV VVNAWTQAEL FRGFEVILRD KDPQAGLVVT
PRACGICGAS HLTCAAWALD TAWKTEVPRN AILARNLGQI AESLQSLPRH HYGLFMIDYT
HKNYSRSKYY EEAVRRWSPY TGTNYELGVT ISGRPVEIYA LLGGQWPHSS FMVPGGVMCA
PTLTDVTRAW SILEHFRRNW MEPVWLGCSF ERYEEIKSYD DFMAWLDERP EHANSDLGMF
WRMSQDIGVD KYGKGHGKYV SWGYLPHEDK YNRPTIEGRN AAVIMKSGVY DGASDTHKLM
DQIHTREDLM HAWYDEQSGK HPFDRVTKPV GKNPVDHTKQ YSWATAVRHD QNGRLEAGPL
ARQLIAGGPH GERWQHHDPL VLDMYRKLGG ASVMLRHFAR MHEGVKLYRQ AEHALREFRL
NDPWYVKPTE KDGRGWGATE AIRGALCHWI EVQGGKIKNY QIITPTTWNV GPRSDRDELG
PIEQALIGTP VADVNDPVEV GHVCRSYDSC LVCTVHAHHA STGKELARFR TA
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