Gene BBta_0447 details

Gene Information

• Locus tag: BBta_0447
• Symbol: cbbT
• ID: 5154919
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Bradyrhizobium sp. BTAi1
• Kingdom: Bacteria
• Replicon accession: NC_009485
• Strand: +
• Start bp: 446297
• End bp: 448312
• Gene Length: 2016 bp
• Protein Length: 671 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 640555466
• Product: transketolase
• Protein accession: YP_001236639
• Protein GI: 148252054
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG0021] Transketolase
• TIGRFAM ID: [TIGR00232] transketolase, bacterial and yeast

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 25
• Fosmid unclonability p-value: 0.127654
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAATCTCG TTGCGGAGCG CAGAGCAGCC TTAGATGAGG CGCAGATGGC GAACGCGATC 
CGCGCGCTCG CGATGGACGC GGTCGAGGCT GCGAAGTCGG GCCATCCCGG AATGCCCATG 
GGCATGGCGG ATGTGGCTAC GGTGCTCTTC AAGCACTTCG TCAAGATCGA CCCGACGCAG 
CCCAATTGGC CTGATCGCGA TCGCTTTGTG CTGAGCGCTG GGCATGGATC GATGTTGCTG 
TACGCGCTTC ATCACCTCCT CGGCTTCCAC GACATGCCGA TGGATCAATT GCGCCGTTTT 
CGTCAGCTCG GTAGTCGCAC TGCCGGGCAT CCGGAATTCG GCCATGCCGC TGGCATCGAA 
ACGACCACCG GTCCGCTCGG TCAGGGAATC GCAACCGCCG TGGGTATGGC TCTCAGCGAA 
CGCATGCTGA ATGCGCGTTT CGGCGATGAC CTCGTCGATC ACCACACCTA TGTGATCGCC 
GGCGACGGCT GCCTGATGGA GGGGATCAGT CACGAGGCGA TTGATCTTGC CGGCCATCTC 
GGCCTTGGCC GGCTCATCGT GCTGTGGGAC GACAACCAGA TCACGATCGA CGGGCCCACA 
AGTCTGTCGA CCTCGCTGGA TCAGAAGGCA CGGTTCGTTG CTGCGGGCTG GCATGTCGCG 
GCCGTCGACG GCCACGACGG TGAAGCGGTC GCCAACGCGA TTATCGAAGC AAGAGCCGAT 
CCCCGTCCGT CCTTGATTGC CTGCCGCACC ATTATCGGCT TTGGCGCACC CAACAAGCAG 
GGGACATCGG CCACGCATGG TGCGCCGCTG GGCAAGGAGG AGGTGGCCGC GGCACGCGAG 
AGCCTCGGCT GGATCTATTC GCCCTTCGAG GTTCCGGAGG CGATCGTCCA TGCCTGGCGC 
GTAGTTGGCG CTCGCGGAAC GCGCATCCGA GCCGAATGGC AAGAGCGGCT CGCTCGCAGC 
CCCCAGCGGG AGGAGTTTGT GGCCCATCTC GCGCCCCCCG ATGCCGCGAG GTTGCACGCA 
GCGTTGGCCG ATCATCGCCG ACGCCTGTGC GGCGAGCGGC CGAAGGTTGC CACTCGCAAG 
GCTTCCGAGC TGGCGTTGGA GGTCGTGAAT TCAACCATCC CCAACATGGT AGGCGGCTCA 
GCCGATCTCA CCGGCTCCAA CAACACGCGC ACCAAGGGCA TGCGTCCCGT GACGCGGAGC 
GATTTCACGG GCAACTACAT CCACTACGGG GTGCGCGAGC ATGGGATGGC CGCGGCGATG 
AACGGCATCT CGCTGCATGG AGGATTGCGC CCCTATGGCG GCACGTTCCT CGCCTTTTCG 
GATTATTGCC GCGGGGCGAT CCGCCTTTCT GCTCTCATGG GTCGGCCGGT CATCTACGTG 
ATGACGCACG ATAGCATCGG CCTGGGGGAG GACGGTCCGA CGCACCAACC GGTCGAGCAC 
CTCGCATCGC TAAGAGCGAT GCCGAACGTC TACGTGTTCC GGCCCGCCGA CGCGGTGGAG 
ACGGCGGAAG CCTGGGAGGT CGCGCTTGCC GCAGCCAAGA CGCCGTCGGT GCTTTGCCTC 
TCGCGGCAGG ATCTGCCGAC GCTGCGCACG GAGCACGGCG ACGAGAACAT GACGGCACGC 
GGCGCCTATC TCCTGCGCGA TCCTGGCGAG CATAGGGATC TGACCATCAT CGCCACAGGT 
TCCGAAGTCG CTATTGCGGT CGAGGCCGCC GACGAGTTGT CGGCGGACGG GCTGGCGGTC 
GCCGTAGTTT CTGCGCCCTG CTGGGAGCTG TTTGCCGCCC AGGAAGCCGG CTATCGCGCT 
GCTGTTCTGG GCGAGGGACC GCGCGTCGGC GTCGAGGCCG GAGTCGCTCT CGGCTGGGCA 
GAATGGCTCG GGCCCAATTC CATCTTCATT GGAATGACGG GCTTCGGCGC CTCTGGTCCT 
GCCGCCGATC TCTACAACCA CTTTGGCATC ACAGCCGAAC GGGTCGCGGC CGAGGGGTGG 
AGGCTCGCCC GTAAGCCCGG GGAGGAGCAC GAATGA 

 

Protein sequence

MNLVAERRAA LDEAQMANAI RALAMDAVEA AKSGHPGMPM GMADVATVLF KHFVKIDPTQ 
PNWPDRDRFV LSAGHGSMLL YALHHLLGFH DMPMDQLRRF RQLGSRTAGH PEFGHAAGIE 
TTTGPLGQGI ATAVGMALSE RMLNARFGDD LVDHHTYVIA GDGCLMEGIS HEAIDLAGHL 
GLGRLIVLWD DNQITIDGPT SLSTSLDQKA RFVAAGWHVA AVDGHDGEAV ANAIIEARAD 
PRPSLIACRT IIGFGAPNKQ GTSATHGAPL GKEEVAAARE SLGWIYSPFE VPEAIVHAWR 
VVGARGTRIR AEWQERLARS PQREEFVAHL APPDAARLHA ALADHRRRLC GERPKVATRK 
ASELALEVVN STIPNMVGGS ADLTGSNNTR TKGMRPVTRS DFTGNYIHYG VREHGMAAAM 
NGISLHGGLR PYGGTFLAFS DYCRGAIRLS ALMGRPVIYV MTHDSIGLGE DGPTHQPVEH 
LASLRAMPNV YVFRPADAVE TAEAWEVALA AAKTPSVLCL SRQDLPTLRT EHGDENMTAR 
GAYLLRDPGE HRDLTIIATG SEVAIAVEAA DELSADGLAV AVVSAPCWEL FAAQEAGYRA 
AVLGEGPRVG VEAGVALGWA EWLGPNSIFI GMTGFGASGP AADLYNHFGI TAERVAAEGW 
RLARKPGEEH E