Gene BBta_0428 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0428 
Symbol 
ID5155041 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp430423 
End bp431562 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content65% 
IMG OID640555446 
Producthypothetical protein 
Protein accessionYP_001236620 
Protein GI148252035 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1940] Transcriptional regulator/sugar kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGACG ACGTGATGAC CACCACGGGA ATTGCCCGGC ACGGCGCCGC GCGGCTGCCG 
TCGGTCGAGA TCGACAGCTT CAACATCGAG ATCAAGGACG AGGACGGCTT CCTCGGCGAC
CGCGCCTCCA AGGGCGCCTT TCGCAAGATC CTGGAGCGCT GGCGCAAGCC CTTACGCAAA
TCCGGCAAGG ATCCGTTCGG CGACGAGGAC AGCGACACCA TCAGCAAGAA GGCGCTGGAC
GCGATCCTGG TCGGTGACGA CACCGAGGCC TCGGCGGTGG TGCATTCGGC GATCGAGGAG
TTCGCCCAGG AGCTCGCCCA TGTCACCCGC CGCTTCCTGC GCACCAAGGC CTGGGCCAAA
ACCGAATGCA TCGTGGTCGG CGGCGGCTTT CGCGATTCCC GGCTCGGCGA GCTCGCCATC
GCGCGCACCG AGATCATCCT GAAGGACGAG GGCTTCGGCG TCGAGCTGGA GCCGATCCGC
TACCATCCCG ACGATGCCGG CCTGATCGGC GCGCTGCATC TGGCGCCGTC CTGGATCTTC
GAGGCCCATG ACAGCATCCT CGCGGTCGAC ATCGGCGGCA CCAATATCCG CTGCGGCGTG
GTCGAGACGT GCTGGAAGAA GACGCCGGAC CTCTCCAAGG CTTCGGTCTG GAAGTCCGAG
CTGTGGCGCC ATGCCGATGA CGAGCCGACG CGCGAAGGTG CGGTGAAACG GCTGGCCAAG
ATGCTCAAAG GGCTGATCGA CGAGGCGGAC ACCGAAGGCC TCAAGCTGGC GCCGTTCATC
GGCATCGCCT GTCCCGGCGT CATCAATGAA GACGGCTCGA TCGAGAAGGG CGCGCAGAAC
CTGCCGGGCA ATTGGGAGAG CAGCAAGTTC AATCTGCCGG CCAGCCTGGT CGAGGCGATC
CCGATGATCG GCGATCACGA CACGGCGGTG CTGATGCACA ATGACGGCGT CGTGCAGGGC
CTTTCTGAGG TGCCGTTCAT GCAGGATTTC GAGCGTTGGG GGGTGCTGAC CATCGGCACC
GGGCTCGGCA ATGCCCGCTT CACCAACCGC CGCAAGGAGA ACGGCCGCAA GGACAAGGAC
GACAAGGCCA AGGACGACAA GGCCGACGAG AAAAAGGCCG CGAAGAAAAA GAAGGACTGA
 
Protein sequence
MADDVMTTTG IARHGAARLP SVEIDSFNIE IKDEDGFLGD RASKGAFRKI LERWRKPLRK 
SGKDPFGDED SDTISKKALD AILVGDDTEA SAVVHSAIEE FAQELAHVTR RFLRTKAWAK
TECIVVGGGF RDSRLGELAI ARTEIILKDE GFGVELEPIR YHPDDAGLIG ALHLAPSWIF
EAHDSILAVD IGGTNIRCGV VETCWKKTPD LSKASVWKSE LWRHADDEPT REGAVKRLAK
MLKGLIDEAD TEGLKLAPFI GIACPGVINE DGSIEKGAQN LPGNWESSKF NLPASLVEAI
PMIGDHDTAV LMHNDGVVQG LSEVPFMQDF ERWGVLTIGT GLGNARFTNR RKENGRKDKD
DKAKDDKADE KKAAKKKKD