| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_0414 |
|---|
| Symbol | ctpA |
|---|
| ID | 5155429 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 418112 |
|---|
| End bp | 419383 |
|---|
| Gene Length | 1272 bp |
|---|
| Protein Length | 423 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640555432 |
|---|
| Product | carboxy-terminal-processing protease precursor (C- terminal-processing protease) |
|---|
| Protein accession | YP_001236606 |
|---|
| Protein GI | 148252021 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0793] Periplasmic protease |
|---|
| TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.479747 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGATCGA CCGCGCGCGC CGCAACTGCC GACACCTATC GCCAGCTCAA CCTGTTCGGC
GACGTGTTCG AACGGGTGCG CAGCGACTAT GTCGAGAAGC CGGACGACTC GAAACTGGTC
GAATCCGCCA TCAGCGGCAT GCTGTCCGGC CTCGATCCGC ATTCGAGCTA CATGGATGCG
AAGAGCTTCC GCGACATGCA GGTGCAGACC CGCGGCGAGT TCGGCGGTCT CGGCATCGAA
GTCACGATGG AAGATGGCCT GATCAAGGTG GTGTCGCCGA TCGACGACAC GCCGGCCTCG
AAGGCCGGCA TCCAGGCCAA CGACATCATC ACCAATCTCG ACGAAGAAGC GGTGCAGGGC
CTCACCCTCA ACCAGGCGGT CGAGAAGATG CGCGGCCCGG TCGGCACCAA GATCAAGCTG
AAAGTGGTGC GCAAAGGCGC CGACAATCCG CTCGATATTA CGCTGACCCG CGACAATATC
CGCGTCCGCT CGGTGCGCTC GCGCATCGAA TCCGACGATA TCGCTTATAT CCGCATCACC
ACCTTCAACG AGCAGACCAC CGAAGGCCTC AAGAAGAGCA TCGCCGATCT GCAGACCCAG
ATCGGAGACA AGCTGAAGGG CTACGTCATC GATCTGCGCA ACAATCCGGG CGGCCTGCTC
GAAGAGGCTG TCACGGTGTC CGACGCGTTC CTGGAGCGCG GCGAGATCGT CTCCACCCGC
GGCCGCAACG CCGAGGAGAC GCAGCGCCGC TCCGCGCATG CCGGCGACCT CACCAAGGGC
AAGCCGGTCA TCGTGCTGAT CAATGGCGGC TCGGCCTCGG CCTCCGAGAT CGTAGCTGGC
GCGCTGCAGG ACCACAAGCG CGCGACGCTC GTCGGCACGC GCTCGTTCGG AAAGGGCTCG
GTGCAGACCA TCATCCCGCT CGGCGCCGGC AACGGCGCAC TGCGTCTGAC GACGGCGCGC
TACTACACGC CGTCGGGCAA ATCGATCCAG GCCAAGGGCA TCGTGCCGGA CATCGAAGTG
CTGCAGGATG TGCCGGACGA GCTGAAGTCG CGCACCGACA CCAAGGGCGA GGCTTCGCTG
CGCGGCCATC TGAAGAATGA TGGCGACGAG AAGACCGGCT CGCAGTCCTA CGTGCCGCCG
GATGCCAAGG ACGACAAGGC GCTCAAGCTC GCCGCCGACC TGCTGCACGG CATCAAGAAC
AGCGCCAACA CGCCGGCGCC CACCACCGAC AAAGCGGCAG CCGACAAGCC GGCGACCAAA
GCGGCGAACT AA
|
|---|
| Protein sequence | MGSTARAATA DTYRQLNLFG DVFERVRSDY VEKPDDSKLV ESAISGMLSG LDPHSSYMDA
KSFRDMQVQT RGEFGGLGIE VTMEDGLIKV VSPIDDTPAS KAGIQANDII TNLDEEAVQG
LTLNQAVEKM RGPVGTKIKL KVVRKGADNP LDITLTRDNI RVRSVRSRIE SDDIAYIRIT
TFNEQTTEGL KKSIADLQTQ IGDKLKGYVI DLRNNPGGLL EEAVTVSDAF LERGEIVSTR
GRNAEETQRR SAHAGDLTKG KPVIVLINGG SASASEIVAG ALQDHKRATL VGTRSFGKGS
VQTIIPLGAG NGALRLTTAR YYTPSGKSIQ AKGIVPDIEV LQDVPDELKS RTDTKGEASL
RGHLKNDGDE KTGSQSYVPP DAKDDKALKL AADLLHGIKN SANTPAPTTD KAAADKPATK
AAN
|
|---|
| |