Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_0414 |
Symbol | ctpA |
ID | 5155429 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 418112 |
End bp | 419383 |
Gene Length | 1272 bp |
Protein Length | 423 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640555432 |
Product | carboxy-terminal-processing protease precursor (C- terminal-processing protease) |
Protein accession | YP_001236606 |
Protein GI | 148252021 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0793] Periplasmic protease |
TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.479747 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGATCGA CCGCGCGCGC CGCAACTGCC GACACCTATC GCCAGCTCAA CCTGTTCGGC GACGTGTTCG AACGGGTGCG CAGCGACTAT GTCGAGAAGC CGGACGACTC GAAACTGGTC GAATCCGCCA TCAGCGGCAT GCTGTCCGGC CTCGATCCGC ATTCGAGCTA CATGGATGCG AAGAGCTTCC GCGACATGCA GGTGCAGACC CGCGGCGAGT TCGGCGGTCT CGGCATCGAA GTCACGATGG AAGATGGCCT GATCAAGGTG GTGTCGCCGA TCGACGACAC GCCGGCCTCG AAGGCCGGCA TCCAGGCCAA CGACATCATC ACCAATCTCG ACGAAGAAGC GGTGCAGGGC CTCACCCTCA ACCAGGCGGT CGAGAAGATG CGCGGCCCGG TCGGCACCAA GATCAAGCTG AAAGTGGTGC GCAAAGGCGC CGACAATCCG CTCGATATTA CGCTGACCCG CGACAATATC CGCGTCCGCT CGGTGCGCTC GCGCATCGAA TCCGACGATA TCGCTTATAT CCGCATCACC ACCTTCAACG AGCAGACCAC CGAAGGCCTC AAGAAGAGCA TCGCCGATCT GCAGACCCAG ATCGGAGACA AGCTGAAGGG CTACGTCATC GATCTGCGCA ACAATCCGGG CGGCCTGCTC GAAGAGGCTG TCACGGTGTC CGACGCGTTC CTGGAGCGCG GCGAGATCGT CTCCACCCGC GGCCGCAACG CCGAGGAGAC GCAGCGCCGC TCCGCGCATG CCGGCGACCT CACCAAGGGC AAGCCGGTCA TCGTGCTGAT CAATGGCGGC TCGGCCTCGG CCTCCGAGAT CGTAGCTGGC GCGCTGCAGG ACCACAAGCG CGCGACGCTC GTCGGCACGC GCTCGTTCGG AAAGGGCTCG GTGCAGACCA TCATCCCGCT CGGCGCCGGC AACGGCGCAC TGCGTCTGAC GACGGCGCGC TACTACACGC CGTCGGGCAA ATCGATCCAG GCCAAGGGCA TCGTGCCGGA CATCGAAGTG CTGCAGGATG TGCCGGACGA GCTGAAGTCG CGCACCGACA CCAAGGGCGA GGCTTCGCTG CGCGGCCATC TGAAGAATGA TGGCGACGAG AAGACCGGCT CGCAGTCCTA CGTGCCGCCG GATGCCAAGG ACGACAAGGC GCTCAAGCTC GCCGCCGACC TGCTGCACGG CATCAAGAAC AGCGCCAACA CGCCGGCGCC CACCACCGAC AAAGCGGCAG CCGACAAGCC GGCGACCAAA GCGGCGAACT AA
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Protein sequence | MGSTARAATA DTYRQLNLFG DVFERVRSDY VEKPDDSKLV ESAISGMLSG LDPHSSYMDA KSFRDMQVQT RGEFGGLGIE VTMEDGLIKV VSPIDDTPAS KAGIQANDII TNLDEEAVQG LTLNQAVEKM RGPVGTKIKL KVVRKGADNP LDITLTRDNI RVRSVRSRIE SDDIAYIRIT TFNEQTTEGL KKSIADLQTQ IGDKLKGYVI DLRNNPGGLL EEAVTVSDAF LERGEIVSTR GRNAEETQRR SAHAGDLTKG KPVIVLINGG SASASEIVAG ALQDHKRATL VGTRSFGKGS VQTIIPLGAG NGALRLTTAR YYTPSGKSIQ AKGIVPDIEV LQDVPDELKS RTDTKGEASL RGHLKNDGDE KTGSQSYVPP DAKDDKALKL AADLLHGIKN SANTPAPTTD KAAADKPATK AAN
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