| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_0316 |
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| Symbol | |
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| ID | 5153842 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 319813 |
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| End bp | 321123 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640555340 |
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| Product | putative multi anti extrusion protein (MatE) |
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| Protein accession | YP_001236514 |
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| Protein GI | 148251929 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.915712 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTCTCG CGCCGATGAT GCTGAGCAAC ATCCTGCAAT CGCTGTTCGG TACCATCAAC
AACGTCTATC TCGGCCAGAT GATCGGGGTG GACGCGCTCG CCGCAGTCTC GGTGTTCTTT
CCAGCGATGT TCTTCTTCGT GGCCTTTGTC ATGGGGCTCG GCTCCGGCGC CAGCATCCTG
ATCGGCCAGG CCTGGGGCGC CAAGGAGCCC GCGAAGGTCA AGGCGATCGC GGGTACGACG
CTGACCATCA CATTGCTGCT CGCCGCGCTG ATCGCGGTCG GCGGACTGTT CAGCCGCGAC
TTGCTGAGCG CGCTCGCAAC GCCCGCCAAC ATCCTCGATG CCGCGGCGGG CTATGCCCGT
ATCATGATGA TCACGATGCC GCTGACCTTC GCCTATATCC TGCTGTCGTC GCAGATGCGC
GCGGTCGGCG ACACCGTGAC ACCGCTCGCT GCGCTGGCTG CATCCACCGT GCTCGGCCTG
GTGCTGACGC CGATCTTCAT CCGCGGCTGG CTTGGGGCGC CGCAACTCGG CGTCGCGAGC
GCAGCCTGGG CCTCGGCGAT CTCGACCTTG GTGACGCTCG GCGGACTCCA TCTTCATCTG
CTCCGGCGCA AGCATCCGCT GGCGATCGAT GCGGCCTTTC TGCGCGGCAT GCGGCCCGAT
CCGAAGCTGC TGCGCATCGT GCTGCGGCTC GGCATTCCCG CAGCGATCGG CATGATCGTG
ATGTCCCTGG CCGAGATGGT GCTGATCGGC CTCGTGAACG GCTTCGGCTC GGACGCGACC
GCCGCCTATG GCGCGGTCAA CCAGGTGCTG GGTTATGTGC AGTTTCCGGC GCTGTCGATC
GCCATCTCGG TCTCGATCTT CGGCGCCCAG GCGATCGGCC GCGGCAGCCC GGAGCAGATC
GGCCGCATCG TGCGCACCGG GGTCGAGATG AATGTCGTGC TGACCGGCGG CCTGGTCGTG
CTGGGCTATC TGTTCTCGCG AACGCTGATG GGGTTCTTCA TCACCGATCC TGAGGTGATC
GAGGTCGCAC AGCGCTCGCT GCACATCGTG CTGTGGAGCT CGGTTCTGTT CGGCATGTCC
ACGACCTTCT CGGCGGCGAT GCGCGCCGGC GGGACGGTGT GGATGCCGTT GGCGATTTCC
GCTTTCTCGA TCGCAGCGAT CGAGGTGCCC GCGGCAACGT GGCTCAGCCG CAGCATCGGC
CTCGACGGCG TCTGGCTCGC TTATCCGATC ACGTTCACCG CGATGATGCT GCTGCAGATG
AGCTATTATC TCCTGGTCTG GCGCAAGCGG ACAGTGCGCC GCATGGTCTG A
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| Protein sequence | MFLAPMMLSN ILQSLFGTIN NVYLGQMIGV DALAAVSVFF PAMFFFVAFV MGLGSGASIL
IGQAWGAKEP AKVKAIAGTT LTITLLLAAL IAVGGLFSRD LLSALATPAN ILDAAAGYAR
IMMITMPLTF AYILLSSQMR AVGDTVTPLA ALAASTVLGL VLTPIFIRGW LGAPQLGVAS
AAWASAISTL VTLGGLHLHL LRRKHPLAID AAFLRGMRPD PKLLRIVLRL GIPAAIGMIV
MSLAEMVLIG LVNGFGSDAT AAYGAVNQVL GYVQFPALSI AISVSIFGAQ AIGRGSPEQI
GRIVRTGVEM NVVLTGGLVV LGYLFSRTLM GFFITDPEVI EVAQRSLHIV LWSSVLFGMS
TTFSAAMRAG GTVWMPLAIS AFSIAAIEVP AATWLSRSIG LDGVWLAYPI TFTAMMLLQM
SYYLLVWRKR TVRRMV
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