Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_0315 |
Symbol | |
ID | 5153841 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 319101 |
End bp | 319706 |
Gene Length | 606 bp |
Protein Length | 201 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640555339 |
Product | hypothetical protein |
Protein accession | YP_001236513 |
Protein GI | 148251928 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3917] 2-hydroxychromene-2-carboxylate isomerase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.126619 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.599326 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAGCCGAC CAGCCCCCGA GTTCCTGTTC GATTTCGGCA GCCCCAACGC CTATCTCAGC CATGAGGCGA TCCCGGCGAT CGAGCAACGT ATCGGCGTCC GCTTCTCTTA TGTCCCCGTG CTGCTCGGCG GCATCTTCAA GGCGACCAAC AACAAGTCGC CGGCCGAGTC GCTCGCCGGC ATCAAGAACA AGCGCGAATT CCACGAGATC GAGACGCAGC GCTTCCTCAA GCGCTATCAC GTCCAGCCCT GGGTCTGGAA CCCGCATTTC CCGGTCAACA CGCTGAACCT GATGCGCGCG GCCGTCGCCG CCCAGTTCGA AGGCGTGTTC GAGGCCTATG TCGACGCGGC GTTCCACCAC ATGTGGCGCG AACCCAAGAA GATGGACGAT CCGGCAACCG CCATCGCGGC GATCACGTCA TCAGGTCTCG ACGGCGCGAA ACTTTTCGCG CGCGCCCAGG AGCCGGAGGT CAAGGCAAAG CTCGTGGAGA ACACGCAGGC CGCGGTCGAA CGCGGCGCAT TCGGCTCGCC GACCTTCTTC GTCGGCACCG ACATGTTCTT CGGCAAGGAA CAACTGCGCG ATGTCGAGGA GATGATCCTC GGATGA
|
Protein sequence | MSRPAPEFLF DFGSPNAYLS HEAIPAIEQR IGVRFSYVPV LLGGIFKATN NKSPAESLAG IKNKREFHEI ETQRFLKRYH VQPWVWNPHF PVNTLNLMRA AVAAQFEGVF EAYVDAAFHH MWREPKKMDD PATAIAAITS SGLDGAKLFA RAQEPEVKAK LVENTQAAVE RGAFGSPTFF VGTDMFFGKE QLRDVEEMIL G
|
| |