Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_0294 |
Symbol | amtB1 |
ID | 5149963 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 299696 |
End bp | 301006 |
Gene Length | 1311 bp |
Protein Length | 436 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640555318 |
Product | ammonium transporter |
Protein accession | YP_001236493 |
Protein GI | 148251908 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0004] Ammonia permease |
TIGRFAM ID | [TIGR00836] ammonium transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.509038 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGGACCT ATGCGTCTCG TTGCCTTCGC GCGTCTGCAG CTTCGGCTGC AGCAGGCGCG GCCATCTTCA CCACGCCTGC CTTGGCGGCT GCACCATCGA CGATCGAACC GGCCGACACC GCCTGGATGA TCGTGGCCAC GGCCCTCGTG CTGATGATGA CCATCCCGGG GCTGGCGCTG TTCTACTCGG GCATGGTGCG CAAGAAGAAC GTGCTGGCGA CGATGGCGCA GAGCCTCGCC GCGGTCATGC TGATCTCGAT CCTGTGGGTT GCGTTCGGCT ATTCGCTGGC CTTCGTCGGC GACGGCGCCT GGATCGGCAC GCTCGACCGC GCCTTCCTCG CCGGCATGGG CATGGAGAGC GTGCATCCCG GAGCCAAGAC GATTCCGGAA GCGCTGTTCA TGCTGTACCA GATGACCTTC GCGATCATCA CGGTGGCGCT GGTGGCCGGC TCGGTGGCCG ATCGCATGCG CTTCTCGGCC TATCTTGTGT TCGGCGTCGC CTGGTTCGTC TTCGTCTATG TGCCGCTGGC GCATTGGATC TGGGGCGGCG GTTTCCTCGC CCAGGCCGGC GTGGTCGATT TCGCCGGCGG CCTCGTGGTA CATCTGTCCG CCGGCACCGG CGGCCTGGTC GCGGCCGTGG TCATGGGACG CCGCCACGGC TATGGCAGCG AGAACCTGTC GCCGTTCGAC CTGTCGCTCG CGGTCGTCGG CACCGGCCTG CTCTGGGTCG GCTGGTTCGG CTTCAATGGC GGATCGGCGC TCGGCGCCAA CGCGCATGCC GTGATGGCGA TCCTGACCAC GCATCTTGCC GCCTGCGCCG GCGCCGTCAC CTGGGGCGCG CTGGAATGGT CGACCCGCCG CAAGCCGTCG GTGCTCGGCA TGATCTCCGG AGCGGTCGCC GGCCTCGGCA CCATCACCCC GGCATCGGGC TTCGTCGCCC CTTGGCACGG CCTGGTCATC GGCGCGCTGG CCGGCATCAT CTGCTACTGG GCCTGCACCT CGCTGAAGCA CCGCTTCAAT TATGACGATT CGCTCGACGT GTTCGGCGTC CACGGCATCG GCGGCCTCAC CGGCACGGTG CTGGCCGGCG TGTTCGCCAC GGCAGCGATC GGCGGCACCG CCGGGCTGAT CGAGGGCAAC CCGAAGCAAC TCGCGGCGCA GCTCTACGGC GTCGCCGTCA CCCTGGTCTG GTCGGGCGGC GTCACCTGGG GTCTCCTGAA GCTGGTCAGC GTCTTCGTGC CGTTGCGGGT GTCCCGCGAG CAGGAACTCG AGGGTCTCGA CATCTCCCAG CACGGCGAAG CGCTGCAATA A
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Protein sequence | MGTYASRCLR ASAASAAAGA AIFTTPALAA APSTIEPADT AWMIVATALV LMMTIPGLAL FYSGMVRKKN VLATMAQSLA AVMLISILWV AFGYSLAFVG DGAWIGTLDR AFLAGMGMES VHPGAKTIPE ALFMLYQMTF AIITVALVAG SVADRMRFSA YLVFGVAWFV FVYVPLAHWI WGGGFLAQAG VVDFAGGLVV HLSAGTGGLV AAVVMGRRHG YGSENLSPFD LSLAVVGTGL LWVGWFGFNG GSALGANAHA VMAILTTHLA ACAGAVTWGA LEWSTRRKPS VLGMISGAVA GLGTITPASG FVAPWHGLVI GALAGIICYW ACTSLKHRFN YDDSLDVFGV HGIGGLTGTV LAGVFATAAI GGTAGLIEGN PKQLAAQLYG VAVTLVWSGG VTWGLLKLVS VFVPLRVSRE QELEGLDISQ HGEALQ
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