Gene BBta_0288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0288 
Symbol 
ID5153206 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp293161 
End bp293898 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content70% 
IMG OID640555312 
Productputative uroporphyrinogen-III synthase 
Protein accessionYP_001236487 
Protein GI148251902 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1587] Uroporphyrinogen-III synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGTGC TGGTGACCCG TCCCGCTCCC GACAATGACC GCAGCGCCAC AGCGCTTCGT 
GCGCGCGGCT TCGAGGTGCT GCTGGCGCCG ATGTTGCGAT TCGAGCCCGT CGCGCTGCCC
GATGACGCCG GCCGCGATGC CGCGGCTGTC ATCGTGACGT CGTCGAACGC GCTGCGCGCG
GCAGCACCGC AGCTCGCGCG GTCCGCGTTG CTGACCCTGC CGCTGTTCGC GGTCGGCGAG
CACACCGCGG CGGCGGCGCG CCAGGCCGGC TTCACCCAGG TGATGTCCGC CGACGGCGAT
GCAGGCGCCT TGCGCGATCT CGTCACGCGC GAGCGCGCCA ACGGCCGCAT CAAGGCGGAT
GCGCCGCTGC TCTATCTCGC CGGAGCCGAC ATTTCGCGCG ATCTCGCGGG CGAGCTCGCC
GGGCGCGGCT TCGAAGTGAT CACCCAGACC GTCTACCGCA TGGCCCCGGT GACGACGCTG
CCGCGCGACG TCTGCGATGC ATTCGCAAAG AACGCCATCA CGGCCGTGCT GCATTATTCG
CGGCGAAGTG CCGCGGCCTT CGTCGCGGCG ATCAGGGCCG ATGGCGTCGA AATTTCGGCG
CTGGCCGTGC CGCATTGCTG CATGTCGGCC AATGTCGCCG AGGTGCTGCG CGAAGCTGGC
GCGACGCAGG TCACAATCGC GGCGCATCCG AATGAAAACG ACATGCTGGA GGGGCTGACC
CGTGCGCTAC GGTCGTGA
 
Protein sequence
MAVLVTRPAP DNDRSATALR ARGFEVLLAP MLRFEPVALP DDAGRDAAAV IVTSSNALRA 
AAPQLARSAL LTLPLFAVGE HTAAAARQAG FTQVMSADGD AGALRDLVTR ERANGRIKAD
APLLYLAGAD ISRDLAGELA GRGFEVITQT VYRMAPVTTL PRDVCDAFAK NAITAVLHYS
RRSAAAFVAA IRADGVEISA LAVPHCCMSA NVAEVLREAG ATQVTIAAHP NENDMLEGLT
RALRS