Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_0285 |
Symbol | |
ID | 5152839 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 287893 |
End bp | 289296 |
Gene Length | 1404 bp |
Protein Length | 467 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640555308 |
Product | hypothetical protein |
Protein accession | YP_001236484 |
Protein GI | 148251899 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.271446 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCACCA CTGCCCTCGA CAATCATACC CAGTTCCAAT CCATCGTCGG CCAGATCCGG ACGCTCGCCT ACAAATATAT CGAGGACAAG GACTTCGTCA GCGCGCAGCT CGCGTTCCAG AAGCTGCTTG AGCTCGACCC CAAGGACATC AATGCCCGCT TCATCTATGC GCAGCTGATC GACGACGGCT CGCACAAGAA GCGCGCCGAG GCGCGCGACA TGATGCTCGC GATCCTCGAC GAGCATCCGG AGATCTTCAA CGATCCGAGC GAGGGCAATC TGCACCTGAT CCGCAGCGCC GCGGTGCGCT GCAGCCATGT CGGGCCGTTC ACGCGCTCGA TGGAGCTGTT CCGCAAGCTC GCGCGCGCCT CCAACCAGGC CGCCGATTAC TTTTCGCTCA GCGAGATCCT GACCCAGGGC AACGAGTTCG AGGAGGCGGT GGCCGCGCTC GAAAAGGCCA TCCAGCTCAA TCCGGCCTAC GACAATCCGA TCAACCGCGA GACACTGGAG CTCGCGCGTT CGAACGCCAA GAAGGGTAAG GCTAAGGACG TCAAGGCCCG CGCCAAGGTC GGACGTTATC CGGAAACCAA GGATTTCCTC GGCGATCTGC AGACGCTGAT CACCAGCCAC ATTGCGGTGA ACCTGGCGGC AGCGCCCAAA TTCCTCGACA AGAGCACGCG CTTCTTCACC ATGGGTTCGT GCTTCGCGCG CAACCTGTCC AAGAGCCTCA ACGACAGCGG CTATTCCAGT CACCACATGG AGATCTCGGA ATATATCAAC ACGACGTTCG CCAACCGCGT GTTCGTCGAC TGGCTGCGCG ACGCCAAGAT CAATCCGGAG ATCGAGGAGC GCATCGTCGA GCTGTTGCCG CCGGGGTCGA GCAAGTGGAG CACGCTGACG GCCATCAAAC AGGCCGACGT CTTCATCCTG ACGCTCGGCG TTGCCGCCGC GTTCTTCGAC CGCGAGACCG GCGCTTTCGT GCTGCCGCGG CCCAGCGCGC TGAACTCCCG CGCGCTGGCC GAGAAGTACA AGTTCCGCAC CGCGAGCGTG CAGGAGAATG TCGACAACGT GCTCTATCTG ATCGACTTCA TCCGCAGCAT CAAGCCGGGC ATCAAGGTCA TCGTCACGGT GTCCCCCGTG CCGCTGCTGA CCTCGTTCGA ATATGAATCG GTGGTGCAGG CCGACTGCCT GTCGAAGAGC ACGATGCGGC TGGTCGCGCA CGAGGTCGTC AACAATTCGA ACCTCCCGGA CATCTGGTAC TGGCCGTCCT TCGAAGTCTT CCGCTGGGGT GGCTCCAACG CGTCGAGCTT CTTCGCCGCC GATGACGGCG CTGCCTGGCA TGTCTCGGAG GACAAGGTGG CGGCCACGGT GCGCGCCTTC GTGCAGACCT TCTCGCCGGC CTGA
|
Protein sequence | MSTTALDNHT QFQSIVGQIR TLAYKYIEDK DFVSAQLAFQ KLLELDPKDI NARFIYAQLI DDGSHKKRAE ARDMMLAILD EHPEIFNDPS EGNLHLIRSA AVRCSHVGPF TRSMELFRKL ARASNQAADY FSLSEILTQG NEFEEAVAAL EKAIQLNPAY DNPINRETLE LARSNAKKGK AKDVKARAKV GRYPETKDFL GDLQTLITSH IAVNLAAAPK FLDKSTRFFT MGSCFARNLS KSLNDSGYSS HHMEISEYIN TTFANRVFVD WLRDAKINPE IEERIVELLP PGSSKWSTLT AIKQADVFIL TLGVAAAFFD RETGAFVLPR PSALNSRALA EKYKFRTASV QENVDNVLYL IDFIRSIKPG IKVIVTVSPV PLLTSFEYES VVQADCLSKS TMRLVAHEVV NNSNLPDIWY WPSFEVFRWG GSNASSFFAA DDGAAWHVSE DKVAATVRAF VQTFSPA
|
| |