Gene BBta_0170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0170 
Symbol 
ID5149872 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp175364 
End bp175915 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content67% 
IMG OID640555195 
Producthypothetical protein 
Protein accessionYP_001236373 
Protein GI148251788 
COG category[S] Function unknown 
COG ID[COG5468] Predicted secreted (periplasmic) protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTCGG CTAGGTTTCG GATCGCTGCG CGCCTGGTCG CCGTGGCCGC TTTGGCTGGC 
CTGACGGCCG GCTGCTTCCA GCCGATGTAT GCCGAGCATG CCGACGGCAC GCCCGGACTG
CGCGACAAGC TGGCCGGCAT CGAGCTGCCG CCGGTCGACA AGCCGAACGC GTCGCCGGAG
GCGCGCATCG GCGTCGGCAT CCGCAATGCA CTCGCCTTCA AGCTCTACGG CACCGCGACC
GGCACGGCGC CGACGCACAA ACTGGTGCTG AAGTTCCAGA CCAGCCGGTC GTCCCTGATC
GTGTCGCAGA CCACGGGCCT GCCGACCACC GAGAATGTCG GCATCGACGC CCAGTACAAT
CTGGTCGAGC TCGCCACCAA CAAGTCGGTC ATGACCGGGA CAACCTTCGC CCGCACCTCC
TACGACATTC CCGGATCGTA TCAGCGATTC TCGCGCCAGC GCGCGTTCCG CGACGCCGAG
GACCGCGCCG CCGAGCAGAT CGCCGAAAAC ATCAAGACCA GGCTCGCGGC CTATTTCACC
GCGGGCACCT GA
 
Protein sequence
MSSARFRIAA RLVAVAALAG LTAGCFQPMY AEHADGTPGL RDKLAGIELP PVDKPNASPE 
ARIGVGIRNA LAFKLYGTAT GTAPTHKLVL KFQTSRSSLI VSQTTGLPTT ENVGIDAQYN
LVELATNKSV MTGTTFARTS YDIPGSYQRF SRQRAFRDAE DRAAEQIAEN IKTRLAAYFT
AGT