| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_0090 |
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| Symbol | |
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| ID | 5155451 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 94985 |
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| End bp | 98455 |
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| Gene Length | 3471 bp |
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| Protein Length | 1156 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640555118 |
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| Product | DNA helicase/exodeoxyribonuclease V, subunit A |
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| Protein accession | YP_001236297 |
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| Protein GI | 148251712 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) |
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| TIGRFAM ID | [TIGR02784] double-strand break repair helicase AddA, alphaproteobacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.195606 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.386807 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGGCGC CGCGTCCGAT CCCGCAGGCC GTGCGCGACG CGCAGACGCG CGCGTCGAAC
CCGGCCGCGT CGGCCTTCGT CTCGGCCAAT GCCGGCTCGG GCAAGACGCA TGTGCTGGTG
CAGCGGGTGA TCCGGCTGCT GCTCGACGGC GTGCCGCCGG AGAAGATTCT CTGCATCACC
TTCACCAAGG CCGCCGCGGC CAACATGGCC GAGCGCGTGT TCTCGACGCT CGGTCATTGG
GTGACGCTCG ACGATGAGGC GCTCGACAGC GCGATCAAAT CCACCGGCAT TCCCACGCCC
GACAAGAAGC TGCGCGCCTC GGCGCGCAAG CTGTTTGCGA GCGCGCTGGA GACGCCGGGC
GGGCTGAAGG TGCAGACCAT CCACGCGCTA TGCACCCGGC TGCTGCAGCA ATTCCCGTTC
GAGGCCAATG TGCCGGCGCG GTTCTCGGTG CTCGACGAGC GCGACCAGAC CGAGATGATG
GAGCGCGCCA ATCTCAAGGT GCTGCTGGAC GCGGCGCGCA CGCCGGACAG CGCGGTCGGC
CGCGCGCTGC AGGTCGCGAT GGCCAACGCG GCCGATTCGA CCTTCAAGGA GGTGGTGCGC
GAGGCCTGTC TCAGCCGTGA CCATTTCATG GCCTGGACCG ACGGCGCGGG TCGCGTCGAG
GTCGCCGCAC AGCAGCTCGG GCAGGTGCTC GGCATCGCGC CGGACGAGAC GCTGGGGGCA
ATCGAGCAGG ACATTCTCGA TGGTCCCAAC CTGCCGCGCG CGGACTGGAC CGAGATCGCC
GCCCGGCTCG ATGGTGGCGC CAAGACGGAC CAGAAGCAGG CCGACCAGCT CCGCGCCGCG
CTGGCGTTCT CGGGCAGCGA TCAGGTCGAC GAATATCTCC GCGTGTTCCT CACCGAGGAC
AAGGAGCCGC GCAAATCGCT GCTGACCAAG AAATTCGCCG ACAGCAATCC CGGGCTTGCT
GGCCTGTTCG AGTCGGAGGC GCGCCGGCTC GACCGCCTGA TCGAGAAGCG CCGCGCCGCG
GTCGTGCGCG ACCGAACCGA GGCGCTGCTG CAAATCGCGA CCGCGGCCGC CGCGAACTAT
CGCCGCGAGA AAGAGGAGCG CGGGCTGCTC GACTATGACG ACCTGATCGA CAAGACGCTG
GTCATGCTCA ACCGCGTCTC TGCCGGCTGG GTACACTACA AGCTCGACCG TGGCGTCGAT
CACGTGTTGA TCGACGAGGC ACAGGATACG AGCCCCAGGC AATGGGACAT CGTCGCTCAC
ATCATCGAGG AGTTCACCGC CGGCGCCGGC GCGCGCGAGG GCCTGACGCG CACGATCTTC
GCGGTCGGCG ACGAGAAGCA GTCGATCTTC TCGTTCCAGG GCGCGGATCC GCATGAATTC
GATGCCCGCA GGCGGCAGCT GCAGAAGCGC TTCACCGATG CCGGCCTGCT GTTCGATCCG
GTGTCCTTCA CCTATTCGTT CCGCTCCGGC CCGACCGTGC TGCACGCGGT CGACCACGTG
TTCCGCGAGC GCGAGGTCTA CAGCAGCATC CATTCGCCCG ATATTGGCTA TCCCGTCCAC
AACTCGCTGA CCGATGCCGG GCCAAGCCTG GTCGAGCTGT GGAGCCTGTG CGAGCGCGAC
GACCGCAAGG AGATCGAGGG CTGGCGCGCG CCGTTCGACG GCGTCTCGGT GACGAGTCCC
GAGGTGAAGC TGGCGCGGCG CATCCAGGCC GAGATCAAGC GGCTGATCCG CGCGGGCACC
ATGACCGGCC ATGACGGAGC GCGGCGGCGG CTGAGCTATG GCGACATGCT GATCCTGGTG
CGCCGGCGCG GCACCGCATT CGATGCCGTG ATCCAGGCGT TGAAGCATGC CGGCATTCCC
GTCGCGGGCG CCGACCGGCT GAAGCTGACC GAGCACATCG CGATCATCGA TTTGATGAAC
CTCGCCGACG CGCTGCTGCT TCCGCAGGAC GACCTAGCAC TGGCCATCGC GCTGAAGAGC
CCGCTATTCG GGCTCGACGA TGACGACCTG TTCAAGCTGG CGTGGCAGCG CCGCGGCTCT
TTGCGCGACG CGCTGACGGC GCAGGCGGCC GATGACCCGC GGCTGCAGGC GGTGCTGCGC
CGGCTGCAGC AATGCGAGCG CCGCGCCGCC GAGGATACGC CGTTCGCCTT CTACGCCTGG
CTGCTCGGCG GCGATGGCGG CCGGCGCCGC ATCCTGGCGC GGCTCGGCCA TGAGGCCAAT
GACGCGCTCG ACGAATTCCT CGAACTGGCG CTGTCCTACG AGCGCAAGGC GCCGGCCTCG
CTGCAGGGCT TTGTCGCCTG GCTGCGCGCC GCCGATACCG AGGTGAAGCG CGACATGGAG
ATCTCGCGCG ACGAGATCCG GGTGATGACC GTGCACGGCG CCAAGGGCCT CGAAGCGTCG
GTGGTGTTCC TGGTCGACAC GACGTCGTCG CCGGCGGATT CGCAGCGGCT GCGGCTGATT
CATGTGTCGC ATGGCGACCA GGAGATCGTG GTCTGGGCCG GGCGCAAGTC GGATGATCCG
CAGCCTGTCG CAACGGCGCG CGCGGCGATG CTCAAGGAGA CCGAGGATGA GTATCGCCGG
CTGCTGTATG TCGCGATGAC GCGCGCCGCG GATCGGCTGG TCATCGGCGG CTGCATGCCC
GGCAACATGA CCAACATCCG CGGCGGCAGC TGGTACGACC TGATGGCGCG CGGACTGGAC
GCGGCGGGCC TCCAGGTCGA GGTGATCGAG ACCGAGGACG GGCCGATCAA GCGCTACGCG
CGGGCGGAGG ATATCGCGGA GACCGCCAAG GATGAGGCGC GACGCATGGT GGAGATGCCC
GTGGAGCTGC CGGCGTGGCT GCGCACGGTC GCCGCCGAGA CGCCCGGCGA GGTCGCCGTG
CTCAGGCCGT CCGATCCCTC CGCCGACGAA CGGCCGGTAC GCTCCGGCGA ATCGCTAGCG
GCGCGCAGCC TCGCGATGCA GCGCGGCACC TTGGTCCACC GCCTGCTGCA GTCCTTGCCG
GAGGTCCTGC CGGAGCGGCG ACGCGACGCC GCCCTGCGCT ACCTGCTGCG CAATGCCGCC
GACTGGCCCG AGGAGCAGCG CACAGGGCTC GCCGAGCGCG TGCTTGCCGT GATCCAGGAC
CCGCGTTTTG CCGCAGTGTT TGCGCCCGGC AGCCGGGCCG AAGTGTCGAT CGTCGGCCGC
CTCGCTTTGC CCGGACAACC GCGCGCGCTG GTGTCCGGCC AGATTGACCG TCTCGTCGTG
ACCGGCTCCG AAGTGCTGAT CGTCGACTTC AAGACCAACC AGCAGCCGCC ATCGGACCTC
GCCGAGGTAC CCCCGGCCTA TGTCCGCCAG CTCGCGCTCT ACCGGGCCGT GCTTGGCCAG
CTGTATCCCC AGAGGGCCGT CCGGGCCGCC CTGCTCTGGA CCGAAGCCCC TGAATTCATG
GAGATTCCGG CCTCCGCGCT GGACGCCATG CTGCCATCCG ATCCCGTCTG A
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| Protein sequence | MKAPRPIPQA VRDAQTRASN PAASAFVSAN AGSGKTHVLV QRVIRLLLDG VPPEKILCIT
FTKAAAANMA ERVFSTLGHW VTLDDEALDS AIKSTGIPTP DKKLRASARK LFASALETPG
GLKVQTIHAL CTRLLQQFPF EANVPARFSV LDERDQTEMM ERANLKVLLD AARTPDSAVG
RALQVAMANA ADSTFKEVVR EACLSRDHFM AWTDGAGRVE VAAQQLGQVL GIAPDETLGA
IEQDILDGPN LPRADWTEIA ARLDGGAKTD QKQADQLRAA LAFSGSDQVD EYLRVFLTED
KEPRKSLLTK KFADSNPGLA GLFESEARRL DRLIEKRRAA VVRDRTEALL QIATAAAANY
RREKEERGLL DYDDLIDKTL VMLNRVSAGW VHYKLDRGVD HVLIDEAQDT SPRQWDIVAH
IIEEFTAGAG AREGLTRTIF AVGDEKQSIF SFQGADPHEF DARRRQLQKR FTDAGLLFDP
VSFTYSFRSG PTVLHAVDHV FREREVYSSI HSPDIGYPVH NSLTDAGPSL VELWSLCERD
DRKEIEGWRA PFDGVSVTSP EVKLARRIQA EIKRLIRAGT MTGHDGARRR LSYGDMLILV
RRRGTAFDAV IQALKHAGIP VAGADRLKLT EHIAIIDLMN LADALLLPQD DLALAIALKS
PLFGLDDDDL FKLAWQRRGS LRDALTAQAA DDPRLQAVLR RLQQCERRAA EDTPFAFYAW
LLGGDGGRRR ILARLGHEAN DALDEFLELA LSYERKAPAS LQGFVAWLRA ADTEVKRDME
ISRDEIRVMT VHGAKGLEAS VVFLVDTTSS PADSQRLRLI HVSHGDQEIV VWAGRKSDDP
QPVATARAAM LKETEDEYRR LLYVAMTRAA DRLVIGGCMP GNMTNIRGGS WYDLMARGLD
AAGLQVEVIE TEDGPIKRYA RAEDIAETAK DEARRMVEMP VELPAWLRTV AAETPGEVAV
LRPSDPSADE RPVRSGESLA ARSLAMQRGT LVHRLLQSLP EVLPERRRDA ALRYLLRNAA
DWPEEQRTGL AERVLAVIQD PRFAAVFAPG SRAEVSIVGR LALPGQPRAL VSGQIDRLVV
TGSEVLIVDF KTNQQPPSDL AEVPPAYVRQ LALYRAVLGQ LYPQRAVRAA LLWTEAPEFM
EIPASALDAM LPSDPV
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